Gene Slin_5266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5266 
Symbol 
ID8729032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6420990 
End bp6421517 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content47% 
IMG OID 
Productresponse regulator receiver protein 
Protein accessionYP_003390036 
Protein GI284040106 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.481643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTAG ATACACCTAG TACCGTTTTA GTACATTTGT CGCTAATTCC ACAACCATTC 
TTAACTAACT ATATGTGCCT TAATCCCCGT ATTCTTCTTA TTGAGGATAA TCCCGACGAT
GTAGTCTCAC TTTGTCTGGC TCTTGAAGAA AGCGTGCCGA ATGTCCGGCT GGCGGTGGTC
AATGACCAAT CCGGTTTAGT AAATTACTTA CGCCACATCG AGCAGGATAA CCACCAGGTG
CCCTGGTTGA TTTTCCTGGA CATGGATTTC CCAGACTCGG TTGACGGGTC CCGAGCCATT
TCACAACTTC AAAGCTATTT TTTGACCTCA TCGAGACGCT CGATTCCGGT TATTGCCATG
AGCTCGTCTA CATCTCTTGC TGATGTACGG GAATTACAAA AAGCAGGCGC CAACGCTTAC
CTGATCAAAT CCGATAATTT CCAGCAGTTG GTAGACGACT GCCGGAACAT CGCCCGGCAC
TGGTTTAAAA CGGTCCTGTT ACCGCCTGAC TCACCCGATT ACAACTAA
 
Protein sequence
MPLDTPSTVL VHLSLIPQPF LTNYMCLNPR ILLIEDNPDD VVSLCLALEE SVPNVRLAVV 
NDQSGLVNYL RHIEQDNHQV PWLIFLDMDF PDSVDGSRAI SQLQSYFLTS SRRSIPVIAM
SSSTSLADVR ELQKAGANAY LIKSDNFQQL VDDCRNIARH WFKTVLLPPD SPDYN