Gene Slin_5251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5251 
Symbol 
ID8729017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6404149 
End bp6404697 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF177 
Protein accessionYP_003390021 
Protein GI284040091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000155726 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCCAT TACGCGCATA CGACATACAC ATTGTCGGCC TTGACAACAA ACGCCATGAG 
TACGATTTTA CATCGGACAC TGCGTTTTTT GCTGCGCTTG AGCAGGAGTT GATCAAAGCA
GGCAACGTTC AGACGCATCT GGTGCTGGAG AAGTCAGAAA CCATGATCCG GCTGGACTTT
CACATCGTAG GTACCGTCGA ACAAACGTGC GACCGTAGCC TCGATGAATA TGATGAACCG
GTCGACACCC GGCAGACAAT GCTGCTGAAG TTTGGCGACC ACAACGAAGA GCTGAGTGAC
GAAATTGAAC TCATTGAGCG CAATACGTCA ACCATTAATG TAGCCCGCTA CATTTTTGAG
TTCATAAGCC TGTCGTTGCC CATGAAGCGG CTCCACCCCC GGTATAGGGA TGAAGACGAC
CAGGACAGCG ATGACCAGAA CGGCAAGCTC ATTTATAGTT CTGATACCGC AACGAGTAAT
GACGATGCAG ACGACCAGAC GGATGTAGAT CCTCGCTGGG CCGCTCTGCG AAAACTGAGT
GATAATTAA
 
Protein sequence
MNPLRAYDIH IVGLDNKRHE YDFTSDTAFF AALEQELIKA GNVQTHLVLE KSETMIRLDF 
HIVGTVEQTC DRSLDEYDEP VDTRQTMLLK FGDHNEELSD EIELIERNTS TINVARYIFE
FISLSLPMKR LHPRYRDEDD QDSDDQNGKL IYSSDTATSN DDADDQTDVD PRWAALRKLS
DN