Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5251 |
Symbol | |
ID | 8729017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6404149 |
End bp | 6404697 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | protein of unknown function DUF177 |
Protein accession | YP_003390021 |
Protein GI | 284040091 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000155726 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCCAT TACGCGCATA CGACATACAC ATTGTCGGCC TTGACAACAA ACGCCATGAG TACGATTTTA CATCGGACAC TGCGTTTTTT GCTGCGCTTG AGCAGGAGTT GATCAAAGCA GGCAACGTTC AGACGCATCT GGTGCTGGAG AAGTCAGAAA CCATGATCCG GCTGGACTTT CACATCGTAG GTACCGTCGA ACAAACGTGC GACCGTAGCC TCGATGAATA TGATGAACCG GTCGACACCC GGCAGACAAT GCTGCTGAAG TTTGGCGACC ACAACGAAGA GCTGAGTGAC GAAATTGAAC TCATTGAGCG CAATACGTCA ACCATTAATG TAGCCCGCTA CATTTTTGAG TTCATAAGCC TGTCGTTGCC CATGAAGCGG CTCCACCCCC GGTATAGGGA TGAAGACGAC CAGGACAGCG ATGACCAGAA CGGCAAGCTC ATTTATAGTT CTGATACCGC AACGAGTAAT GACGATGCAG ACGACCAGAC GGATGTAGAT CCTCGCTGGG CCGCTCTGCG AAAACTGAGT GATAATTAA
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Protein sequence | MNPLRAYDIH IVGLDNKRHE YDFTSDTAFF AALEQELIKA GNVQTHLVLE KSETMIRLDF HIVGTVEQTC DRSLDEYDEP VDTRQTMLLK FGDHNEELSD EIELIERNTS TINVARYIFE FISLSLPMKR LHPRYRDEDD QDSDDQNGKL IYSSDTATSN DDADDQTDVD PRWAALRKLS DN
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