Gene Slin_5247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5247 
Symbol 
ID8729013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6401078 
End bp6401641 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content45% 
IMG OID 
Producttranslation elongation factor P 
Protein accessionYP_003390017 
Protein GI284040087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.956535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGA CCGCAGATAT CCGTAACGGA TTGGTTCTTA ATTACAACAA CGATCTATTT 
CAAATAACTG AATTTCAGCA CGTAAAGCCA GGCAAAGGTG CCGCTTTCGT TCGTACGAAA
TTGAAAAGCC TGACAACAGG CCGGGTAATT GACAACACCT TCAACTCAGG GGCGACAATT
TATCCCGTTC GTGTAGAGCG TCGGAAATTC CAATACCTTT ACAAAGACGA AGCCGGTTTT
AACTTTATGG ACCAGGAATC GTTTGATCAG ATTAACCTAG ACGAAAAACT CGTGGATGGT
GCCGATCTGA TGAAAGAAGG TCAGGAAGTT GAAATTTTGA TAAATGCTGA CAGCGATACA
CCACTTTCGT GCGAGTTGCC TCCATTCGTT GAATTGGAAG TGACCTACGC CGAGCCGGGC
ATTAAAGGTG ATACCGCCAA CAGCCCTAAA AAGCGGGTTG AAGTAGAGTC GGGAGCTAAA
ATCATGGTGC CCCTCTTTAT TGAATCCGGT CAGAAAATCC GCGTTGATAC CCGTACCCGA
GATTACGTAG AACGAGTGAA ATAA
 
Protein sequence
MATTADIRNG LVLNYNNDLF QITEFQHVKP GKGAAFVRTK LKSLTTGRVI DNTFNSGATI 
YPVRVERRKF QYLYKDEAGF NFMDQESFDQ INLDEKLVDG ADLMKEGQEV EILINADSDT
PLSCELPPFV ELEVTYAEPG IKGDTANSPK KRVEVESGAK IMVPLFIESG QKIRVDTRTR
DYVERVK