| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5235 |
|---|
| Symbol | |
|---|
| ID | 8729001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 6390051 |
|---|
| End bp | 6391328 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF349 |
|---|
| Protein accession | YP_003390005 |
|---|
| Protein GI | 284040075 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.809819 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACG CTTCACTGGT AGATGAATAC GGTTACGTCA AAGACGGAAA GGTATTTTTG
AAAGGCTACC TGAATTACGA AGACCGCCAG ATTGGCGAAG TCAAACGCAC CGAGCAGGAA
GCGCTCGATT ATTTCAAGAA TCGCTTCATC ATCGCGGAGA ACAAAGTCAG CCAGCTAGAA
AAAGATATTG AAGAGGCTCA GAACAAAGGC TCTTATCTAA CAAAACTGGT TCAGCTTCGT
AAGAAGCTCC TCGGTTTTGA CGCACTGGGC GATTTCCCTC CCCTGCTTGA GCGCCTGGAC
GAGCAGGAAA AACTGCTGGC TGACCTGATT ACGGTCAATC AGCTGAAAAA CCTTGAAATA
AAACGAGCCC TGATCGCCGA AGCTGAAGCT CTGGCCGATA GTACCGACTG GCGTAACACA
GCCGATGCCC TTCAGGAAAT CAAGGTGAAA TGGATCAAAA CGGGTCCTGT CGACAAAGCG
ACGGAGGCCG AAGTGGAAGG CCGGTTTCAG GAACTTCTGG ATGGCTTCTT TACCCGCCGA
CGTGAGTTCT TCAACGAACA GAACAAGGTT ATTCAGGAGC GGCTTGAAAA ATACGATGAA
CTGATTCGAC TTGCCTTCCG GGCCAACCGC CTGGGCGATC TGGATGCAGC TTTTCAGGAA
GTACGCAAAT TAAACAATGC CTGGAAACAG GTGGGTGAGG TGCCCATCAA AAAGAGCGGC
AAGCTCTACA AGCAGTTTAA GAAGGCGACG ACCATGTTCT ACGCCAAATA CAACGACGCG
AAGGGCATTG TAATCGTACC GAAGATCGAT CCTCGCATCG AGCAGCAGAT GAAAATGGCC
GACGAAGCCG AAAAGCTCTC GAAACAGTCT GATATTTTTG CCGCTGCCGA ACGGGCCAAA
GTGCTACTCA ATAGCTGGAA GGAAATTCGG GTGCCATTTA AGCTTCAGGA TAAAGTCGTT
AATGAACGCT TCCGGGCAGC CTGCGACAAG ATTTTCGAAC TTAGTTATCT GGGACGGGTA
TTGACGCGTA AATACCCGGC GTTTGAACTC AAAAGCCAGT CGGAACAGAT TCGGACGAAG
ATTCGGGAGA TGGAGTACCT GGTCAAGCGG GAGAAGAACG ACCTTCAGTT TGCTTTACAG
GACGCCGACG GTCTCGACCC GAACAAGGAC GAAGACAAGC AAATCCTGAA CAAGATCAAC
ACCCAGAAGC GCAAAATCGC CATGAAAGAG ACTATTCTTC GTGAGTTTCA GAAGCAACTG
GAAACAGCAG GCTATTAG
|
|---|
| Protein sequence | MENASLVDEY GYVKDGKVFL KGYLNYEDRQ IGEVKRTEQE ALDYFKNRFI IAENKVSQLE
KDIEEAQNKG SYLTKLVQLR KKLLGFDALG DFPPLLERLD EQEKLLADLI TVNQLKNLEI
KRALIAEAEA LADSTDWRNT ADALQEIKVK WIKTGPVDKA TEAEVEGRFQ ELLDGFFTRR
REFFNEQNKV IQERLEKYDE LIRLAFRANR LGDLDAAFQE VRKLNNAWKQ VGEVPIKKSG
KLYKQFKKAT TMFYAKYNDA KGIVIVPKID PRIEQQMKMA DEAEKLSKQS DIFAAAERAK
VLLNSWKEIR VPFKLQDKVV NERFRAACDK IFELSYLGRV LTRKYPAFEL KSQSEQIRTK
IREMEYLVKR EKNDLQFALQ DADGLDPNKD EDKQILNKIN TQKRKIAMKE TILREFQKQL
ETAGY
|
|---|
| |