Gene Slin_5231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5231 
Symbol 
ID8728997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6386447 
End bp6387478 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390002 
Protein GI284040072 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.180658 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.555488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAACA GATTTATACT GACAATTTTG ACGCTGACCC TAAGCCGACT TGCCTTTGCT 
CAGGACCCTC AGTTCACTCA ATTTTATGCG GCTCCCCTGT ATCTGAACCC GGCATTTGCC
GGTTCGGCAC TGGCGCCACG CATAACGGCT AACTACCGGA ACCAATGGCC GGCCATTACG
AACTACGTGA CAACGATGGT TGGTGTGGAT CACTTCATCG AAAAGTACAA CAGTGGTGTG
GGGCTACTGA TTCAAAGCGA TAACCAGGGA CAGGGAAGGA TTCAATCGAC GGATATAGGG
TTGCAATATG CTTACCAGTT TCAGGTAAGC GAATCGGCGT TTGTGCGGCT TGGTTTACAA
GGCTCTTACG TAAACCGAAG TATCAACTAC TTTGGTCTAA CCACGGGCGA TCAATTTACC
GACCGGGGTT TTATCACGGG CAGCATCTCC GGCGACCCAA CCTTACAGGG CGGATTACCT
ACCAAAAAAT ACATGGATTT TTCGACCGGC GGCCTTTTTT ATTCCGACTG GTTCTGGATT
GGCGCAGCAG CCCACCACAT CAACCGGCCC GAGCAGGGAT TCTTTGCCGG AGATCAGGAG
CGATTACCGA TGAAGACCAG CATTCAGGCC GGATTACGTA TCCCGCTGGG TGGCTTTACG
GGTCTGGCCG ATGAGGAGGA CCGCGAAATC AGTTTCTCAC CCGTACTTAT GTACAAACAT
CAGGGCAAAT ATGATCAATT AGACATAGGC GCTTATTTGA CGTACTCACC GCTAACCTTT
GGTGCCTATT ATCGGGGCAT TCCCTTCAAA AAGTATAATC AAACGCTGAA CAACCACGAT
GCCGTTGCAG CATTAATCGG CTGGCGCATG GAAAAATTTT CTATTGGCTA CAGCTACGAT
ATTACCATTT CTACGCTCGG TAACAGCGGA GGTTCACACG AGTTATCCCT CTCGTATGTG
TTCGACAAGC CGGAAGCGCG CCGGGGCGGG GTCAAACGGC GCAGCAAGAA ACTCCCCTGT
CCAAAGTTTT AA
 
Protein sequence
MFNRFILTIL TLTLSRLAFA QDPQFTQFYA APLYLNPAFA GSALAPRITA NYRNQWPAIT 
NYVTTMVGVD HFIEKYNSGV GLLIQSDNQG QGRIQSTDIG LQYAYQFQVS ESAFVRLGLQ
GSYVNRSINY FGLTTGDQFT DRGFITGSIS GDPTLQGGLP TKKYMDFSTG GLFYSDWFWI
GAAAHHINRP EQGFFAGDQE RLPMKTSIQA GLRIPLGGFT GLADEEDREI SFSPVLMYKH
QGKYDQLDIG AYLTYSPLTF GAYYRGIPFK KYNQTLNNHD AVAALIGWRM EKFSIGYSYD
ITISTLGNSG GSHELSLSYV FDKPEARRGG VKRRSKKLPC PKF