| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5194 |
|---|
| Symbol | |
|---|
| ID | 8728960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 6339406 |
|---|
| End bp | 6340377 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_003389965 |
|---|
| Protein GI | 284040035 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGGA TTGACTGCAT TTTTGGCTAT ATGACCAGGT ATAGACCCGC AGCGTTGCGT
CGACGAACAA AAACCAGGAT TATTTTTCTG ACCATAGGCC TGGCCTTTGT ATCCGCTTTG
TGGTTGCCCG TAGCTGCTCA ATCACGCCCG ACTTTAGCAA AGTTACGCCA GCAGATCGAA
CAGGAGCTGA GCAGGCATCC CGGCACATTC GCCGTTGCCT TTAAAGACCT GAAAACCGGT
AAGGAGCTGC TTATTCGGGA GCATGAGGTG TTCCATGCGG CTAGTACCAT GAAAACGCCG
GTCATGATTG AGGTCTACAA ACAGGCCGCT CAGCATAAAC TGGCCCTCTC TGACTCCATG
ACCATAACGA CGGACTTCAA GAGTATTGTG GATGGGAGTT CCTATAGCCT TCATGCCGAG
CAGGATAGCG ACACGAGTAT CTACAAAGCC GTAGGGACGA AGCGAACCCT GGCAGCTTTG
GTGTATGACA TGATTATTGT GAGCAGTAAC CTGGCGACAA ACATGGTTAT TGAGCGCGTC
GGTGCCCAAA ATGTAACGCA GACCATGCGC GATTTAGGAG CAAAAGACAT TCAGGTTCGA
CGGGGGGTAG AAGACAGCAA GGCTTTCGCC CAGGGGCTCA ACAACACGAC GACCGCTTAC
GATCTGATGG TCATTTTTGA AAAAATTGCA AGAGGAAAAG CCGTAAGCCC CGACGCATCG
AAAGCCATGA TTACTACGCT ACTCGACCAG AAATTCAACG ATGCCATTCC GGGAAAGCTG
CCGAAAGACG TGAAAGTAGC GCATAAAACG GGTTCAATAA CCGGTGTTCG GCATGATTCG
GGCATCGTTT TCCTACCCGA TGGCCGGAAG TATGTTCTGG TCCTCCTGTC GAAGGAGATT
AAAGACGATA AAGAGACAAT TGAGACAATG GCAACGGTAT CGCAATGGAT TTACGACTTC
GTAAAGCAGT GA
|
|---|
| Protein sequence | MSRIDCIFGY MTRYRPAALR RRTKTRIIFL TIGLAFVSAL WLPVAAQSRP TLAKLRQQIE
QELSRHPGTF AVAFKDLKTG KELLIREHEV FHAASTMKTP VMIEVYKQAA QHKLALSDSM
TITTDFKSIV DGSSYSLHAE QDSDTSIYKA VGTKRTLAAL VYDMIIVSSN LATNMVIERV
GAQNVTQTMR DLGAKDIQVR RGVEDSKAFA QGLNNTTTAY DLMVIFEKIA RGKAVSPDAS
KAMITTLLDQ KFNDAIPGKL PKDVKVAHKT GSITGVRHDS GIVFLPDGRK YVLVLLSKEI
KDDKETIETM ATVSQWIYDF VKQ
|
|---|
| |