Gene Slin_5193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5193 
Symbol 
ID8728959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6338481 
End bp6339368 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content53% 
IMG OID 
Productcyclase family protein 
Protein accessionYP_003389964 
Protein GI284040034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.98741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAAAC GAGTACGGTT TGATTTTGAG ATACAGTTTA CCAACGGCGG TAGCCTGAAG 
GGTGAAGATT TTCGGTTGGA TATCGACGGT GATACCATTT CCGACCAGGC CCTGACGGAC
TACATTATTG CCGATTTACG GCTGTTGATG GTGGGGCGAA CGCGTATTTT CAATAAGGCC
ATTATTACCG AAGCGCACAA GCGGACACCC GTAGCCGACG CGGGGCAACG GACGCGGCTT
ATCGATTTGA GCCACACCAT TGAAGATGGT CTTGTTACCT ACAAAGGACT GCCCGCGCCC
ATCGTTTGCG ATTACCTGAG TCGTGAAACC TCCCGTCAGT TCTACGAAGC CGGTACCGAG
TTTCAGATTG GCAAGATCGA GATGGTTACC AATACCGGAA CCTACTTAGA CTGTCCTTTT
CATCGGTATG CAGATGGTAA AGACCTGTCT GAGTTCGGGC TGGAAGCGTT TGCGGATCTG
GAAGGCACCG TTATTCACGT ACCTCATACC GATACGCTGG CTATCACGGA AGCTCATTTA
CAGTCATACG AAATCAGAAA TCGGGCCGTC CTGATCCATA CCGGCTGGGC CGATTTCTGG
AATACAGACG CGTACTACGA AAATCACCCG TTCTTAACTG CCGATGCAGC TACGTACCTG
CGCGATTGCG GGGCGAAGCT GGTGGGTATC GACTCACACA ACATCGACGA CACCCGGGGT
AAGAGCCGCC CAGTACACAC TACCTTGCTG GGCGCGGATA TTCTAATTGT GGAGCACTTG
TGCAATCTGG AAGCTCTTCC CGCCAACGGG TTTACCTTCA GCGCTACGCC ACCCAAATTC
AAGGGCGTCG GAACATTCCC CGTGCGGGCA ATGGCGAAGG TGCGGTAA
 
Protein sequence
MQKRVRFDFE IQFTNGGSLK GEDFRLDIDG DTISDQALTD YIIADLRLLM VGRTRIFNKA 
IITEAHKRTP VADAGQRTRL IDLSHTIEDG LVTYKGLPAP IVCDYLSRET SRQFYEAGTE
FQIGKIEMVT NTGTYLDCPF HRYADGKDLS EFGLEAFADL EGTVIHVPHT DTLAITEAHL
QSYEIRNRAV LIHTGWADFW NTDAYYENHP FLTADAATYL RDCGAKLVGI DSHNIDDTRG
KSRPVHTTLL GADILIVEHL CNLEALPANG FTFSATPPKF KGVGTFPVRA MAKVR