Gene Slin_5176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5176 
Symbol 
ID8728942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6321239 
End bp6322000 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389947 
Protein GI284040017 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCT TCCTGCTCTT CTGGGTGTTT ATGCTGTTTG CCCGCCAGGC CTTTCCGCAG 
GCTGTTTTAT CAACCGTCTT TTCTTATAGT CATTCCGCTG TTTCGGTACA GACTGGTCAT
GAAGAACGAA CCTTAGCCGA AGGTACCACC CGTGATTTCC CCCACTTCCT GATTCAGGCA
ATAACCCTGG AGGCCAATCA GCCCACCCAG CCTGTCCAGC AACTCGATGA AGAAGTGATC
CTGCTCGTCA GATCAGGTGA ATTAACGCTG ATGCTTGGCG GGAAACACAA AACTCTGGTA
CCCGGGAGCG TCGTTATGGT TATGCCCGGT GATGACTACC GGGTTGAAAA CAAGGCTAGT
CAGCCCCTAA CCTATTACCT GATACGCTAC ACGTCCAACG AAATGCCCGA TCTGGATTTA
TACAGGCTAT TGGGCGGCTC GTTCTGGGCT GACTGGCGGG AGATTGCTCC GACCACCAAC
CAACAAGGGA GTAGCCGCAA GCTATCGCCC TACCCGACCA TCATGAGCGA CCGTGTAGCC
ATGGAGTTTG TGAGTATTAA TGCTGGTATG GCAGGACAGC CGGTTCACAG GCACCGGGCG
GCTGAACTCC TACTCATCCT GGATCATCCG GTTCAGGTCC CTATCGACGG GGCGCAAAAG
GAGGCACAGG TCGGCGACCT TATCTTTATC GAATCGGATG TAGAGCACGG CATTAATCCG
GCCCGTCCGG AAGGCTGTAG CTATGTATCT GTCGTGTTTT AG
 
Protein sequence
MKSFLLFWVF MLFARQAFPQ AVLSTVFSYS HSAVSVQTGH EERTLAEGTT RDFPHFLIQA 
ITLEANQPTQ PVQQLDEEVI LLVRSGELTL MLGGKHKTLV PGSVVMVMPG DDYRVENKAS
QPLTYYLIRY TSNEMPDLDL YRLLGGSFWA DWREIAPTTN QQGSSRKLSP YPTIMSDRVA
MEFVSINAGM AGQPVHRHRA AELLLILDHP VQVPIDGAQK EAQVGDLIFI ESDVEHGINP
ARPEGCSYVS VVF