Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5176 |
Symbol | |
ID | 8728942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6321239 |
End bp | 6322000 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003389947 |
Protein GI | 284040017 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCCT TCCTGCTCTT CTGGGTGTTT ATGCTGTTTG CCCGCCAGGC CTTTCCGCAG GCTGTTTTAT CAACCGTCTT TTCTTATAGT CATTCCGCTG TTTCGGTACA GACTGGTCAT GAAGAACGAA CCTTAGCCGA AGGTACCACC CGTGATTTCC CCCACTTCCT GATTCAGGCA ATAACCCTGG AGGCCAATCA GCCCACCCAG CCTGTCCAGC AACTCGATGA AGAAGTGATC CTGCTCGTCA GATCAGGTGA ATTAACGCTG ATGCTTGGCG GGAAACACAA AACTCTGGTA CCCGGGAGCG TCGTTATGGT TATGCCCGGT GATGACTACC GGGTTGAAAA CAAGGCTAGT CAGCCCCTAA CCTATTACCT GATACGCTAC ACGTCCAACG AAATGCCCGA TCTGGATTTA TACAGGCTAT TGGGCGGCTC GTTCTGGGCT GACTGGCGGG AGATTGCTCC GACCACCAAC CAACAAGGGA GTAGCCGCAA GCTATCGCCC TACCCGACCA TCATGAGCGA CCGTGTAGCC ATGGAGTTTG TGAGTATTAA TGCTGGTATG GCAGGACAGC CGGTTCACAG GCACCGGGCG GCTGAACTCC TACTCATCCT GGATCATCCG GTTCAGGTCC CTATCGACGG GGCGCAAAAG GAGGCACAGG TCGGCGACCT TATCTTTATC GAATCGGATG TAGAGCACGG CATTAATCCG GCCCGTCCGG AAGGCTGTAG CTATGTATCT GTCGTGTTTT AG
|
Protein sequence | MKSFLLFWVF MLFARQAFPQ AVLSTVFSYS HSAVSVQTGH EERTLAEGTT RDFPHFLIQA ITLEANQPTQ PVQQLDEEVI LLVRSGELTL MLGGKHKTLV PGSVVMVMPG DDYRVENKAS QPLTYYLIRY TSNEMPDLDL YRLLGGSFWA DWREIAPTTN QQGSSRKLSP YPTIMSDRVA MEFVSINAGM AGQPVHRHRA AELLLILDHP VQVPIDGAQK EAQVGDLIFI ESDVEHGINP ARPEGCSYVS VVF
|
| |