| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5163 |
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| Symbol | |
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| ID | 8728929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6302958 |
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| End bp | 6305282 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | two component regulator propeller domain protein |
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| Protein accession | YP_003389934 |
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| Protein GI | 284040004 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.522129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATG TAGTTCATAT TGCTCCAGTA AAAACCAGAT TCAGAAAGCT GATTGACGGC
TCATCATTCA TCTCTCATCT TTCAATTTTT GTCCGTCTAC TCGTAACGAC TTGTCCGGCG
TTTGCCCAGA TCGGTAGCTG GCAAACACAT GTTAGCTATC AGTCAGGACG CTCGGTGGCG
GTGATTGGTA CAACCGTGTA CGCTGCCACC CAAAACGGTT TTTTCTACTA TAATAAAACT
ACCGGCGAAA CAACCACCCT CGGTAAACAG GATGGTTTGA GCGATGTGGG TATTAGCCGC
CTGCTGTATC TACCCGATCA GAAACGGCTA CTCATCGCTT ACCAGAACGG TAATATCGAC
TTTCTGAACC TGACCGGCAC CAACGAGCCC GGAACCGTCG ATAATGTAAA CACCATTGTC
ACTGCATCGG CGCTCCCTGC CGCCAGAGGC ATTAACCACA TTAATCGAAT TGGCTCGTCC
GCCTATCTAA GTACCGATTT CGGCCTTGTC GTACTGGATT TACAGAAGAA TGAAATCCGG
GATACCTATT TCAGTCAGCG AGCGGATGGC ACCCCGCTGC CTATCTTTCA AACAGCCGTC
ACAAATGATA GCCTTTATGC CTTAACTGCA CCACTACGGG CTACCGATAT CGGACGTCGG
CTTCGGGCGG TGCGTTTCGC GGCCAACGTA AATATTGCAG ACCCCGCCAA CTGGAGGCCG
GTTACCGAAC CGGGTCTGCA AATCGAGTCC ATTGTGAGTA ATCAGGGACG ATTGTCGGCT
ACTGTCAACG CACAGGGTGT GTATGAACGC CAGGCGGGTG GATGGGTGCT GGTACAGGCA
CTCACGAACC CACTGATCCG GCAATTTCCG ACCGGAAACG GACTGATTTT GGCGACTAAT
CAGGCGGTAA CTCTTTCGGG CTCTGGTTCA TTTACCGGCT CTTTACTAAA TAATCCAAGG
GAAGCACTGG CCGACGGCAA CACGGTATGG GTTGCCGATG CGTCAAGCGG GCTGCTGGCG
GGCAATGCCG GTACGTTTCA GCGAATTGCT CCGGAAGGCC CAACCCGCGA TTTGTTTCCT
CAACTGTATG CCTACACCCA AACGCTGGTT GCCTTACCTG CCGGTCCCTT AGACGCTACC
CCGCTGGCGG GCAATCAGCC GCCTGTTGAT GTACTATCGG TGCCAACTGA ACGATGGGCC
AGCAATCCGG TCTCCAGCCT GACACGCGGG TTCAACGCAG CCGCCTACGT AGCGGTCGAG
CAAAAACTTT ATCTGGGCAG TTTTGGCGGG GGGCTCTGGA GCCGGGCCGA CGGGCAGGCC
ACAACGGTAG TTACTCCTAC GGCGGTTGCC CTCCCTGCTA CGATCAGTCC TTTTATCACC
AGCCTGGCCA CAGATATAGA CGGAAACCTA TGGCTGACAA CCGGGCGAAC AACGTCTACC
CAAGCCACGC TGCACGTTCG TCGATCCAGC GGCCAGTTTC AATCATTTCC AGTCGTCAAT
CAGACAAACA TCGTCCAGAT TGTACCCGAC GACAATGGTT TCCTGTGGCT TCGCCCTGAT
TTGGGTGGCG GCTTGCAGGT CTTCGACCCC CAAACGAACC GCATCCGGTT TCTAGGTACC
GGCACCGGGC AGGGCGGCTT ATTGACAAAT ACTGTTCGGG CACTGGTAAA AGACCGGACG
GGCGCGATCT GGGTAGGGAC CGATCTGGGG CCAACGGTTT TTGATAATCC TGCCGGTGCG
TTCGATGCAG CCATTGACGC CCAGCCGCCT GTAATTAACC GGCGTCGGTT GCTGGCCAAT
GAACTGATCA CGGCCATTGC TGTCGATGGC GGCAACCGAA AGTGGCTGGG TACCCGAAGC
GGTCTATACC AGGTTGCACC CGATGGCTCA CAACTGCTCA ACACATTCAC CGCAGCCAAC
AGTCCCTTAC CGAACAATAC GGTTCAGGCG CTGGCTATCG AGCCTGTCGG CGGCAAGGTA
TTTATCGAAA CCGGAACGGC AGACCAGCCC AACGGCCTGG TTTCTTACCA GGGCACCGCT
ACTGAACCCG CTTCGGTGCT CAGTAAGCTG ACGATCTTTC CCAACCCCGT CCGCCCGGAC
TTTACGGGTA CCGTTGGCAT CAATGGCTTA ACGGACAATG TTACAGTCAA AATTCTTGAC
GCTGGCGGTC AACTTGTCTA CGAAACCCGG TCGCTGGGGG GGACCGCTAC TTGGGGACTT
CGCGATTACC GGGGCCGCAT GGCTCAAACG GGCATTTACC TGGTCGTGGT TGTTACCGCC
GACGGCTCCG AAGGACTGGC CGGTAAACTG GCTATAGTGC GCTGA
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| Protein sequence | MNDVVHIAPV KTRFRKLIDG SSFISHLSIF VRLLVTTCPA FAQIGSWQTH VSYQSGRSVA
VIGTTVYAAT QNGFFYYNKT TGETTTLGKQ DGLSDVGISR LLYLPDQKRL LIAYQNGNID
FLNLTGTNEP GTVDNVNTIV TASALPAARG INHINRIGSS AYLSTDFGLV VLDLQKNEIR
DTYFSQRADG TPLPIFQTAV TNDSLYALTA PLRATDIGRR LRAVRFAANV NIADPANWRP
VTEPGLQIES IVSNQGRLSA TVNAQGVYER QAGGWVLVQA LTNPLIRQFP TGNGLILATN
QAVTLSGSGS FTGSLLNNPR EALADGNTVW VADASSGLLA GNAGTFQRIA PEGPTRDLFP
QLYAYTQTLV ALPAGPLDAT PLAGNQPPVD VLSVPTERWA SNPVSSLTRG FNAAAYVAVE
QKLYLGSFGG GLWSRADGQA TTVVTPTAVA LPATISPFIT SLATDIDGNL WLTTGRTTST
QATLHVRRSS GQFQSFPVVN QTNIVQIVPD DNGFLWLRPD LGGGLQVFDP QTNRIRFLGT
GTGQGGLLTN TVRALVKDRT GAIWVGTDLG PTVFDNPAGA FDAAIDAQPP VINRRRLLAN
ELITAIAVDG GNRKWLGTRS GLYQVAPDGS QLLNTFTAAN SPLPNNTVQA LAIEPVGGKV
FIETGTADQP NGLVSYQGTA TEPASVLSKL TIFPNPVRPD FTGTVGINGL TDNVTVKILD
AGGQLVYETR SLGGTATWGL RDYRGRMAQT GIYLVVVVTA DGSEGLAGKL AIVR
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