| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5146 |
|---|
| Symbol | |
|---|
| ID | 8728912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 6285343 |
|---|
| End bp | 6286029 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | electron transport protein SCO1/SenC |
|---|
| Protein accession | YP_003389917 |
|---|
| Protein GI | 284039987 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.272149 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGGGA TTCGATTCCT GTTTCGCACT AGTATCGTAG TCCTTTGGGC ACTAAGTCTG
GTCGCTTGTC ATAAACAGGA ATCGACAGAC GGTACAGAAG CGTCTATTGA AGAGGCTGTC
CCGTACTACA ACACACCGGA TTTTACGCCC ATCTGGCTTA GCGACCCGGA CGAGGTAGAA
ACTAAAATCA CCCATCGAAC GGGCGACTTC AGCTTCCGCG ACCAGACCAA TGCACTCGTT
ACCCAGCAAA CCCTGGCGAA CAAAATTCAC GTCGCTAATT TCTTCTTTAC GGCCTGTCCG
ACTATATGTC CGAAGATGAC CAACCTGCTT AAGGCCGTTC AGGATACTTT CCAACATGAG
CCCCGAGTAG CGTTGCTTTC CTTCAGCGTA ACACCCTGGC TCGACTCAGT GCCCCGGCTT
CGTAAATACG CTGCTGAAAA AGGAGTTATA GCCACTAAAT GGCACCTGCT CACCGGCGAT
CGGGGCAAAC TTTATACGCT GGCCCGCCGG TCTTATTTCG CCGAGGAAGC CATCGGTTTC
ACCAAAGACT CTACCGAATT TCTCCATACA GAGCATATCA TTCTTGTCGA CCGGAACCGT
CGAATTCGAG GGGTTTATAA CGGGACGCTG CCGCTGGATA TCGACAAATT AATTACAGAC
ATCAAATTGT TATTACGAGA AATCTGA
|
|---|
| Protein sequence | MSGIRFLFRT SIVVLWALSL VACHKQESTD GTEASIEEAV PYYNTPDFTP IWLSDPDEVE
TKITHRTGDF SFRDQTNALV TQQTLANKIH VANFFFTACP TICPKMTNLL KAVQDTFQHE
PRVALLSFSV TPWLDSVPRL RKYAAEKGVI ATKWHLLTGD RGKLYTLARR SYFAEEAIGF
TKDSTEFLHT EHIILVDRNR RIRGVYNGTL PLDIDKLITD IKLLLREI
|
|---|
| |