Gene Slin_5144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5144 
Symbol 
ID8728910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6284000 
End bp6284803 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389915 
Protein GI284039985 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.371857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATA CACCCATCAA GCTAACCAGT CTGACACTAC TTTGCTCCTT TGTGGTTTTT 
ATCGCCTGCC AGACAAACGA TAACAACGTC TCACCAACCA CGACCACCAC AACGGGTACA
ACAAGCTCAA CAGCTACCAG TATCGGCACG GGCGTTCCGG ACGTGTACAA AAAGATTTAC
GGAGCTACGG AGATTTATGT AGAAGGAGCT AACATTGTTA TCAAGACCAA GGGACGCCCC
GACCACAAAA GCCCATATTA CCAGGGAACA GCTTGGGAAA GTACGCTTTA TGAAGCTTAC
AACGGTACAA ATACCAAATA CGCCATTAAC CCTAACCGGA TTGCCGAGGT AAACCTGACG
TTTAAAATAC CGATGAACCC GGTCGTTGAT GCGGCCCATG CAGAAACTCC GCTGGGAGCC
ATTGGGGTCT CGCTCAATGG TGTTGCCTTT TTCAATCAGT ATGCCGCGCA ACGGGCTGTA
CTGACCAACG AGATCAACGG CTTTGATCAG TACAACGGGC ACCCACAGCA ACAGGGGCAG
TACCATTACC ACATTGAGCC AACTTATCTG ACAAAAGTTA AGGGGAAAGA TGCTCTGCTG
GGCTTTCTGC TGGACGGTTT TCCGGTATAT GGGCCGGTAG AAAATGGCAA AACCATCACC
AATGCCGATC TGGCTAAGTA TCACGGACAC ACGAGCGCAA CGGCTGACTA CCCGAACGGA
ATCTATCACT ATCACATCAC CGCCGAAGAC CCTTACCTCA ATGGCAGCGG ATATTATGGT
AAAGCGGGCA CCGTTACGCA GTAA
 
Protein sequence
MNNTPIKLTS LTLLCSFVVF IACQTNDNNV SPTTTTTTGT TSSTATSIGT GVPDVYKKIY 
GATEIYVEGA NIVIKTKGRP DHKSPYYQGT AWESTLYEAY NGTNTKYAIN PNRIAEVNLT
FKIPMNPVVD AAHAETPLGA IGVSLNGVAF FNQYAAQRAV LTNEINGFDQ YNGHPQQQGQ
YHYHIEPTYL TKVKGKDALL GFLLDGFPVY GPVENGKTIT NADLAKYHGH TSATADYPNG
IYHYHITAED PYLNGSGYYG KAGTVTQ