Gene Slin_5110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5110 
Symbol 
ID8728876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6248401 
End bp6249336 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389884 
Protein GI284039954 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCC CTCTGATTGC ACTCTCTCTT ATTTACATAA GCCTGACTAA CGTTCGGGCA 
CAGTATCGAG TCAGACATTC TTTAATACCC TACTCTGAAG TTGGTATCGG TGCTGGTTCT
GCGATTTATC GGGGCGATCT GGCTCCTATA AGCCAGTTGG TTCAACCCAT CGCACCACTA
CCCCGCTGGA ACATTGGTCT ACACTATACT CGTCACCTGA CTCCTTACTT TTCCGCTCGG
GCTTCGTTTA CCTGGATACG TTTAGTTGGC GACGATTACA CCTACAACAA AGACAACCCA
AACCGCAACC CAGTCCAGTT TCACCGAAAC CTGCATTTCA GGAATGATCT GAAAGAACTA
GCCGTAAGTG GCATTTATCA ATTCAGGCCC GAAACACCAC GCCCAGACCA ACGTCCATTT
CTAACCCCAT ACCTAACATT GGGGTTGGCA TTGGTCGCTC ATAACCCACA GGCACGTATT
CCAACCCGCC TTTCCGGCGA TGGATTAGGA GAATGGACAG ATTTACAACC GCTGGGAACC
GAAGGGCAGG GGCAACCCGG CTACGCAAAG CCTTATTCGC TCATTACGTT GGCAATACCC
GTGGGCATGG GCCTCCGCTG GAAACTCAAC CAACGCCTTA ACGTGTCTGC CGAGCTTAGC
TTCCGCTACA CCTTTACCGA TTACCTCGAC GACGTGAGTG GCCTATACCC CAACAAAAGC
GATCTCTCTA ACGAACAGGC AGCTGTGCTT TCTGACCGGC GGTACGAGGC TACAGATGCC
CGCACGGGTC AAAGCCGAAC GTATGAACTC GCCAGCCTGA CGAGTGTATC AACCAATGTA
AGACGAGGAT TGCCCGGCAA TGATATTTAT ATACTGACTC AACTGGCCGT TCATTACCTG
ATTCCGACAT CTATAAAATG CCCGGACTGG CGGTAG
 
Protein sequence
MKLPLIALSL IYISLTNVRA QYRVRHSLIP YSEVGIGAGS AIYRGDLAPI SQLVQPIAPL 
PRWNIGLHYT RHLTPYFSAR ASFTWIRLVG DDYTYNKDNP NRNPVQFHRN LHFRNDLKEL
AVSGIYQFRP ETPRPDQRPF LTPYLTLGLA LVAHNPQARI PTRLSGDGLG EWTDLQPLGT
EGQGQPGYAK PYSLITLAIP VGMGLRWKLN QRLNVSAELS FRYTFTDYLD DVSGLYPNKS
DLSNEQAAVL SDRRYEATDA RTGQSRTYEL ASLTSVSTNV RRGLPGNDIY ILTQLAVHYL
IPTSIKCPDW R