Gene Slin_5087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5087 
Symbol 
ID8728853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6223795 
End bp6224628 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content50% 
IMG OID 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_003389861 
Protein GI284039931 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0347861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC AAACTCCTTC TCCAGCACCC GCCAAAGCAC CGGCACCAAA AAAGAAGTCA 
GGTGGTCTAA ACCCCGCATT CGTAATTCCG GTATTGTTGC TGATCGGTAT CCTGACGTAC
ATGTTCGTCT TCGGTGATGG TAGCCACTTC CAGGAAGGCG ACAATACGAA AGAACCACTT
CCAGGCGACT ACTTCGGTAC GGTCTATAAG GGAGGCTTCA TCGTACCAAT TCTGTTTACC
TGTTTTCTAA CGGTACTGGT ATTCTCCATT GAGCGTTTCA TTACCATTGG CCGCGCCAAC
GGTTCGGGCT CTATCGATGA TTTCGTACGG AAAATCAAAG GCCAGCTTGA CCGTAATGAA
GTAGCTGCTG CTATTCAGGA GTGCGACCGT CAGAAAGGTT CGATTGGCAA CGTTGTGAAA
ACAGCCCTGA TCAAGTATCA GCAGTTAGCT ACCGACACTC AATTAGACAA AGAGCAGAAG
CTGGTAGCCC TGCAGAAAGA AGTAGAAGAA GCTACGACGC TGGAACTGCC TATGCTGGAA
AAAAACCTGA CCATCATTGC TACGCTGGCT TCGGTTTCGA CACTGATCGC CCTGCTTGGT
ACGGTACTTG GTATGATTCG CGCTTTCGCA GCCATGGGTG CTACAGGACA GCCTGACACA
GGTGCACTTT CGACGGGTAT CTCTGAAGCC CTTGTAAACA CGGCTCTGGG TATCGGTACT
GCCGCTATCG CTACGATCAT GTATAGCTAT TTCACCAGCC GTATCGACGT GCTGACCTAC
AACATCGACG AAATCGGCCT GAGCATTCAG CAGAACTTCG CAGCCCATTA TTAA
 
Protein sequence
MKTQTPSPAP AKAPAPKKKS GGLNPAFVIP VLLLIGILTY MFVFGDGSHF QEGDNTKEPL 
PGDYFGTVYK GGFIVPILFT CFLTVLVFSI ERFITIGRAN GSGSIDDFVR KIKGQLDRNE
VAAAIQECDR QKGSIGNVVK TALIKYQQLA TDTQLDKEQK LVALQKEVEE ATTLELPMLE
KNLTIIATLA SVSTLIALLG TVLGMIRAFA AMGATGQPDT GALSTGISEA LVNTALGIGT
AAIATIMYSY FTSRIDVLTY NIDEIGLSIQ QNFAAHY