Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_5087 |
Symbol | |
ID | 8728853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6223795 |
End bp | 6224628 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_003389861 |
Protein GI | 284039931 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0347861 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACAC AAACTCCTTC TCCAGCACCC GCCAAAGCAC CGGCACCAAA AAAGAAGTCA GGTGGTCTAA ACCCCGCATT CGTAATTCCG GTATTGTTGC TGATCGGTAT CCTGACGTAC ATGTTCGTCT TCGGTGATGG TAGCCACTTC CAGGAAGGCG ACAATACGAA AGAACCACTT CCAGGCGACT ACTTCGGTAC GGTCTATAAG GGAGGCTTCA TCGTACCAAT TCTGTTTACC TGTTTTCTAA CGGTACTGGT ATTCTCCATT GAGCGTTTCA TTACCATTGG CCGCGCCAAC GGTTCGGGCT CTATCGATGA TTTCGTACGG AAAATCAAAG GCCAGCTTGA CCGTAATGAA GTAGCTGCTG CTATTCAGGA GTGCGACCGT CAGAAAGGTT CGATTGGCAA CGTTGTGAAA ACAGCCCTGA TCAAGTATCA GCAGTTAGCT ACCGACACTC AATTAGACAA AGAGCAGAAG CTGGTAGCCC TGCAGAAAGA AGTAGAAGAA GCTACGACGC TGGAACTGCC TATGCTGGAA AAAAACCTGA CCATCATTGC TACGCTGGCT TCGGTTTCGA CACTGATCGC CCTGCTTGGT ACGGTACTTG GTATGATTCG CGCTTTCGCA GCCATGGGTG CTACAGGACA GCCTGACACA GGTGCACTTT CGACGGGTAT CTCTGAAGCC CTTGTAAACA CGGCTCTGGG TATCGGTACT GCCGCTATCG CTACGATCAT GTATAGCTAT TTCACCAGCC GTATCGACGT GCTGACCTAC AACATCGACG AAATCGGCCT GAGCATTCAG CAGAACTTCG CAGCCCATTA TTAA
|
Protein sequence | MKTQTPSPAP AKAPAPKKKS GGLNPAFVIP VLLLIGILTY MFVFGDGSHF QEGDNTKEPL PGDYFGTVYK GGFIVPILFT CFLTVLVFSI ERFITIGRAN GSGSIDDFVR KIKGQLDRNE VAAAIQECDR QKGSIGNVVK TALIKYQQLA TDTQLDKEQK LVALQKEVEE ATTLELPMLE KNLTIIATLA SVSTLIALLG TVLGMIRAFA AMGATGQPDT GALSTGISEA LVNTALGIGT AAIATIMYSY FTSRIDVLTY NIDEIGLSIQ QNFAAHY
|
| |