| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5054 |
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| Symbol | |
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| ID | 8728819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6157761 |
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| End bp | 6158453 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003389828 |
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| Protein GI | 284039898 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.699739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACCC CCATCATGGA TAAGGATGAA AAAATTAGAC GCAATCGCGC GAAGACCACA
CAGCGCATTG TCGAAGCTCT GGAAGAGGTA ATAGCCGAAC GCGGTATCGA GGGCGTAGGT
GTAAACCGCG TTGCCGAAAA GGCTAATGTC AGCAAGGTAC TGATATATAG ATATTTCGGC
GGCATGGAAG GCTTGTTTGA ATATTATGTA AAGATGGGGA AACTGTTTCC AATATTTACG
CCCTCTGTTT TAGATCAGAT ACGTCCATTG CACGAATCGG ATATTGCCCG AATCTGGTAT
CGGCAGGTCA TCCAGACATA CCGGTATTTC CGTACGTTCA AAGCCGCTCG TGAAATCCTC
AAGGCAAGTG TTATTGAGAA CGACCCGATT GCCGAAACAA CGGCCCGGGC GCAGGATGAT
GAAATGACGC GGCTCGTTAG CCAGCTTTCC TTTGTAAAGG GAGCCGACAC GCAGGCGATT
TCAGCTATTA TTCTCGGTGC TATGACCTAC CTGACCATCA TGGCACAAAA CGACCGGACT
ATGGTGAGTA TCGACCTCCG GAGTGAAGAG GGCTGGAACC GCATTGAGAA CGCAGTAAAA
GCTATCTACA TTTCACTAAA TAAGATGGCG ATCCATACTA AAGACGTTGA ACTTGAACTC
CAGTCTTCCC ATTTTCCAGT AGCCCAATGG TAG
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| Protein sequence | MQTPIMDKDE KIRRNRAKTT QRIVEALEEV IAERGIEGVG VNRVAEKANV SKVLIYRYFG
GMEGLFEYYV KMGKLFPIFT PSVLDQIRPL HESDIARIWY RQVIQTYRYF RTFKAAREIL
KASVIENDPI AETTARAQDD EMTRLVSQLS FVKGADTQAI SAIILGAMTY LTIMAQNDRT
MVSIDLRSEE GWNRIENAVK AIYISLNKMA IHTKDVELEL QSSHFPVAQW
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