| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4979 |
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| Symbol | |
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| ID | 8728743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6066617 |
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| End bp | 6070183 |
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| Gene Length | 3567 bp |
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| Protein Length | 1188 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003389756 |
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| Protein GI | 284039826 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00000632908 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACGTT TTCTTTCGCT ACTACTCAGC GTTCTGCTGA GTAGTAGTCT GGTCCATGCT
GTGCCTCTTT CGGCGCAGGA ACTGATGAAT CGCCCCGTTT CCATAACGGT AGAAGGCGAG
ACGGTACGAA CGGTATTGCA GCAATTGGAG AAGGCTGTCG ATGTGCGCTT TGTGTATAGC
CCGCGGGTGA TTGGTGCCGA AAAGCGCATT TCGATCAGTG CCCGCAATGA ACGATTGGCA
AGTGTGCTCC AGCGGTTGTT TACGCCCCAG AACATAGCCT GGGAGGTCAT TAACGGGCAG
ATCATTTTGA AAAAAGTGGA TGGGCAAAGC AGCCTGCTGT CTGTTCCGGC TTTTCAGATC
AACCGGGTCG TCACGTTCGA CCAGCCCCGA CGCATCCTGT CGGGGGTAGT GCGCGATAAC
GCTAGTAACC AGCCGTTGCC CGGTGTGAGT ATTGTCGTGA AAGGCACCAC ACGCGGCACC
TCGACTAACG CCGACGGAAG CTTTTCGCTG AATATCCCCG ATGCCGGTGG CAATATGATT
CTGTCTTTCT CTTTCATCGG CTACGAAACG CTGGAGGTGC CGGTAAATGG CGGCCAGTCG
ATGATCAACG TAACCCTCAA AGAAACGCAG AACGCGCTGA GCGAAGTGGT CGTCGTAGGG
TACGGTACCC AGAAGAAAGT GAACCTGACG GGAGCCGTTT CGCAGGTGCT GGCCAAAGAA
CTCGAAAACC GGCCGTTGAA CAACATGTCG CAGATTCTTC AGGGCATGGT GCCCAACCTG
AACATTACCT TCAGCACGGG CCAGCCGGGG CAGGGCGGCA ACCTGAACGT ACGGGGCGAA
ACGTCGATCA ATGGGGGCGG GCCGCTGGTG CTGATCGACG GTATTCCCGG TGACATCAAC
CGCATTAACC CGGCCGACGT GGAGTCAGTA TCGGTGCTGA AAGATGCGGC TGCTTCGGCG
ATTTACGGGG CGCGGGGTGC GTTCGGGGTT ATTCTGGTGA CGACCAAAAC GGCGAAAAAT
GGCAAGACGA CCATATCGTA CAGCAATAAC TTTGGCTGGT CGGCTCCTAC GGTTAGCACC
AAATTTCTGA CTAATGGCTA TGAGTATGTG CGGATGAACG ACGAAGCCTT TACGCGGGCT
ACCGGCAACA GCTACACGCG TTATTCGGAG GAAGATTATA AGGAACTGGA GGCCCGTCGG
TATGATAAAG TGGAAGATCC ATCGCGCCCC TGGACAGTGA TCAAAAACGT AAACGGAAAA
GATATATACA ACTACTACGG GAATTACGAC TGGTGGAACA CGCTCTTCAA CACGACGGAG
CCTTCTAAAC AACACAACAT CAACCTGTCG GGTGGGACCG ACAAGGTCAA TTATTTTCTG
TCGGGGTCGA TCTTCGAGAA AGACGGGATC ATGAAAATCA ACACCGACAA ATTCACGTCC
TACACCCTCC GCAGCAAGAT CAACGCCCAG TTAACGCCGT GGCTGAAGGT GGGTAGCAAT
ATCCAGTATT TCGATTCGAA GTATAAATAT CCCGGTCTGG AAGGGGGCGC CAACGCCAAC
TTTGTGGGTA TCACGGTTCA TGCTTTACCG GCTTATGCCC CAACGAATCC CGATGGGACA
GCCACGTATA ACACCCTGAA AAACAACTAT TCCATTGGCG ATGGGCTGTA TGCAAATCTG
CTGAAAGGCG TTGCCGGGGG CGAGAAACGG GTACACGAAC TAACGGCGAT CAACTCGGTT
ACCATCGACT TCACCAAAAC CTGGAACCTG GTCGCCAATT ACTCGTACTC GTTTTACATC
GCCGACGACT GGTACCGGTC TGCTGTGGCG CAGTACTCCA TTCAGCCGGG GATTCTGGCG
ACGGTGCCTA ACTACAACAC GGATCAGTAC CGCAAAACGT TCTGGTTCGA TCCAATGAAC
GTGACCAACG TGTATTCGTC CTACAACCAT ACGTTCGGGA AACACTATGT TGCGGCTACG
GCGGGGATCA ATTACGAATC CAAAAAACAC CAGCGGCTGT TCGGGGCTCG CAAGAACCTG
CTTTCCGAAA GCCTTAACGA CCTCAACCTG GGCACGGGCG AGCAACTATC GGCCGGGGAT
TCGTATCAGT ATTCACTGTT CGGGGCTTTC TATCGCCTGA ACTACGACTA TGCCGGTAAG
TACCTGCTGG AAGTGAACGG CCGCTACGAC GGAACATCAC GTTTTGGCGA AGGTCGGCGG
TACGGGTTCT TCCCCTCGGT TTCGGCGGGA TGGCGACTGA GCGAAGAGCG TTTCTTCGAT
CCGTTGAAGG GTGTCGTCGA CAATTTCAAA ATTAGGGCTT CGTACGGTAC GCTGGGGAAT
CAGTTGCCGT CTAATACCAA CTCGGCTAGT TTTTATCCGT ATATCTCCAT CATGCCAACG
GCGCAGTCGA GCTGGATAAC CAACGGGCAG AAACTCTCGT ACGTAAACAG CCCGAACCCG
ATTTCGCCGG ACCTAACCTG GGAGAAAGCG ACCACCTCCA ACCTGGGTCT GGATGCGGGC
CTGTTGAAGA ACCGACTGAA TCTTTCCGCC GACGTCTACA TCCGAAACAC AACGGGTATG
CTGGTGCCGG GTCAGGTGCT GCCGTCGGTT TACGGAGCGA CCGTGCCGAC CCAAAACGCC
GGAGATTTAC AGACAAAAGG TTTCGAATTG TCCATCGGCT GGCGCGATCA GGTGAAGGTG
GCGGGCAAGC CGTTCGTGTA TAATGCGTCG TTCGTCCTGT CTGATTCCAA ATCGACGATC
ACCAAATACG ACAATCCGAA CAAGATTCTG TCGAGCCGTT ACGAAGGGCA GACCATTGGC
GATATCTGGG GCTATTCCAT TGATGGGTAT TTCAAGACCA ACGAAGAAGC GCAGACGTAT
GCCGTCGATC AAACACTCGT TAACAAGCAA CGCCTGAGCG CCCCCGGCGA CTGGAGCAAG
CTACAGGCCG GTGACCTGAA GTTTATCGAT ACCGACGGAA ATGGCAAGAT CGACCAGGGA
GCTAACACGC TGGCGAATCA CGGCGACTTG AAAATTATTG GTAACGACCG GGCGCGTTAT
CGTTACGGGG TTAATCTCGG TGCGAGCTGG AATGGCTTCG ACATGTCGGT GCTGGCGCAG
GGTATCGTTC GGAAAAGCTG GTATCCCGGC AACAACGCCG ATAAATTCTG GGGGCCTTAT
TCGCGGCCGT ATTACTCGTT CATTCCGGAG AATTTCGAAG CCGACGTCTG GACACCGACG
AATACAGACG CCTATTTCCC GGTGCTGAGG GGCTACACGG CCCTGAACGG TGGCGGTGAT
CTGAACGCTG CGAATGACCG CTACATTCAG AACATCGGCT ACCTGCGGCT GAAGAACGTG
GTCATTGGCT ACACATTGCC GGAAAGCCTT ACTAAAAAGA TCAGCATTGC CCGCGCCCGG
GTTTATGTAA GCGGTGAAAA CCTGCTTACC TATACGCCCC TGCGCTCCAA ATACATCGAT
CCCGAGCAAC TCGATGGCGA CGCCACCAAC GGCAGAACCT ACCCGCTCTC CAAAACAATT
TCTGCCGGTC TGAACCTCAC GTTTTAG
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| Protein sequence | MKRFLSLLLS VLLSSSLVHA VPLSAQELMN RPVSITVEGE TVRTVLQQLE KAVDVRFVYS
PRVIGAEKRI SISARNERLA SVLQRLFTPQ NIAWEVINGQ IILKKVDGQS SLLSVPAFQI
NRVVTFDQPR RILSGVVRDN ASNQPLPGVS IVVKGTTRGT STNADGSFSL NIPDAGGNMI
LSFSFIGYET LEVPVNGGQS MINVTLKETQ NALSEVVVVG YGTQKKVNLT GAVSQVLAKE
LENRPLNNMS QILQGMVPNL NITFSTGQPG QGGNLNVRGE TSINGGGPLV LIDGIPGDIN
RINPADVESV SVLKDAAASA IYGARGAFGV ILVTTKTAKN GKTTISYSNN FGWSAPTVST
KFLTNGYEYV RMNDEAFTRA TGNSYTRYSE EDYKELEARR YDKVEDPSRP WTVIKNVNGK
DIYNYYGNYD WWNTLFNTTE PSKQHNINLS GGTDKVNYFL SGSIFEKDGI MKINTDKFTS
YTLRSKINAQ LTPWLKVGSN IQYFDSKYKY PGLEGGANAN FVGITVHALP AYAPTNPDGT
ATYNTLKNNY SIGDGLYANL LKGVAGGEKR VHELTAINSV TIDFTKTWNL VANYSYSFYI
ADDWYRSAVA QYSIQPGILA TVPNYNTDQY RKTFWFDPMN VTNVYSSYNH TFGKHYVAAT
AGINYESKKH QRLFGARKNL LSESLNDLNL GTGEQLSAGD SYQYSLFGAF YRLNYDYAGK
YLLEVNGRYD GTSRFGEGRR YGFFPSVSAG WRLSEERFFD PLKGVVDNFK IRASYGTLGN
QLPSNTNSAS FYPYISIMPT AQSSWITNGQ KLSYVNSPNP ISPDLTWEKA TTSNLGLDAG
LLKNRLNLSA DVYIRNTTGM LVPGQVLPSV YGATVPTQNA GDLQTKGFEL SIGWRDQVKV
AGKPFVYNAS FVLSDSKSTI TKYDNPNKIL SSRYEGQTIG DIWGYSIDGY FKTNEEAQTY
AVDQTLVNKQ RLSAPGDWSK LQAGDLKFID TDGNGKIDQG ANTLANHGDL KIIGNDRARY
RYGVNLGASW NGFDMSVLAQ GIVRKSWYPG NNADKFWGPY SRPYYSFIPE NFEADVWTPT
NTDAYFPVLR GYTALNGGGD LNAANDRYIQ NIGYLRLKNV VIGYTLPESL TKKISIARAR
VYVSGENLLT YTPLRSKYID PEQLDGDATN GRTYPLSKTI SAGLNLTF
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