| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4973 |
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| Symbol | |
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| ID | 8728737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6058636 |
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| End bp | 6060735 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | cytochrome c biogenesis protein transmembrane region |
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| Protein accession | YP_003389750 |
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| Protein GI | 284039820 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000000476148 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATCAA TTAGTACGCT CGTTGTGTGG CTGCTTGTCA GCCTGACTGC ACTGGCGCAA
ATACGTAAAG ACCCAACCAG TTGGTCAGCT AAAGTCGACA AGCAACCTGC TCAGGTTGGC
GATGTTATTA GTGTCCGTAT TCAGGTCAGT ATTGACCAAA ACTGGCATGT TTACTCCAAT
GACCTCGATC CAAATATTGG TCCATTGCCC ACTACGTTCA AGTTTCCGGC ATCCGATGCC
TATACGCTTG TTGGAAAGGT AACGCCGGTT GGTGTACAGG AGGTTTACGA AGAAGTCTGG
GGCGCGAAAG TGCGTCAGTT CGAGAATAAA GCCGTTTTCG TTCAGAAAGT TAAACTGCTC
AAGCCGACAG CCACGTTCTC CGGTACAGCC GAATACATGT CCTGCTCGTC GAAAGACGGC
ACCTGCCTTC CACCGGCTGA AGCTGACTTT TCGGTAGCTA TCAATGCATC GTCGGCAGCT
ACGGCACCCG CCAGCCCCAC GGTAGCCTCA GCACCAACTA CAGCATCAGT GGTTACGTCA
CCCGTTTCTG AAACTGCCGT TGCGGCCACT ACACCCGTCG AAACTGAAAC AAAGGCCGCA
TCCTTAACAG ATGCCCAGAT TGATTCAAGT GTTTCGAAAG CGCTTACCCC ACCGGACGCA
AACGTTGAAG AAGGTACACC GGCTACAAGC GGCTCTTTAT GGAGCTTTAT GCTGGCAGCT
TTCCTGTCGG GTTTGGTAGC GTTGCTTACC CCCTGTGTGT TCCCAATCAT TCCGGCTACG
GTTAGTTTCT TTACCAATCA GCAGGGTGGT CAGTGGAAAG CGTTACTGTA TGGCGCTTTT
ATCATTGGCA TTTATGTACT GATCGGCACC GTGGTGTCAC GGTTCAACGG CCCGGCTTTC
GCCAATTTCG TCAGCACGCA CTGGCTTCCG AACATTCTAT TTTTTGCCAT CTTCTTCATC
TTCGGCTTAT CGTTTTTGGG TCTGTTCGAG ATCGTATTGC CCAACTCGCT CATCAACAAG
GCCGATGCCA AATCGGAGCA GGGTGGTATC GCCGGTATTT TCTTCATGGC CTTTACGCTG
GTGCTGGTGT CGTTTTCCTG CACGGGTCCC ATCGTCGGCA GTTTGCTGGT AGCTTCGGCG
GGTGGCGAAG TTGTCAAGCC GATTCTGGGA ATGGCCGCTT TCTCGTCGGC TTTTGCGATT
CCGTTCACCT TATTTGCGGC CTTCCCGCAA TGGCTGAAGA ACCTGCCCCG GTCGGGTGGT
TGGCTCAACT CGGTGAAAGT GGTGCTTGGC TTCCTGGAAC TGGCGCTGGC GTTGAAGTTC
CTGAGCATTG CCGATCAGGT ATATCACTGG GGCCTGCTTG ACCGCGAAGT GTTCCTGTCG
CTCTGGATCG TCATTTTTGC GCTGATTGGC TTTTACTTCC TCGGCAAACT CCGGTTACCG
CACGATAGCG AAACCAAGTA CATCAGCGTA CAGAAACTGC TGCTGGCTAT TGTAACCCTC
TCGTTTGTGG TGTACATGAT TCCTGGCCTC TGGGGCGCTC CATTGAAAGC ATTATCCGGT
TATCTACCAC CCGAAACGTC GCAGGACTTC AACCTGACCA ATGCACAGGT AGCCGCCAGT
CCAGCCAATG CACTCGGTGA GACACCCAAA TACGCCAATC TGTTTCACCT GCCCCACGGC
TTGCAGGGTT TCTTCGATTA CAAACAGGCG CTGGCTTATT CTAAAAAGGT TAATAAACCC
ATCTTCATCG ACTTCACCGG ACACGGCTGC GTGAACTGCC GCGAGATGGA AGCCCGCGTC
TGGTCGGACC CGGCGGTGAT GTCGCGCTTA CAGAACGACT TTGTGATTCT GGCCCTGTAC
GTAGACGACA AAACCGAACT ACCCGAAGCG GATTGGTACA CGTCGACTTA CGATCAGAAA
GTAAAGAAGA CGATTGGCGC ACAAAATGCT GACCTGCAAA TCACGAAGTT CAACAACAAC
GCCCAGCCGC ATTATTGCCT GGTCAACAGC GAGGGTAAAT TGCTGGTATC ACCTAAAAAC
TACGACCGTG ATATTTCGCA CTTCGTAGCG TTTCTGGACT CAGGAAAGGC GAAGTTCTGA
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| Protein sequence | MKSISTLVVW LLVSLTALAQ IRKDPTSWSA KVDKQPAQVG DVISVRIQVS IDQNWHVYSN
DLDPNIGPLP TTFKFPASDA YTLVGKVTPV GVQEVYEEVW GAKVRQFENK AVFVQKVKLL
KPTATFSGTA EYMSCSSKDG TCLPPAEADF SVAINASSAA TAPASPTVAS APTTASVVTS
PVSETAVAAT TPVETETKAA SLTDAQIDSS VSKALTPPDA NVEEGTPATS GSLWSFMLAA
FLSGLVALLT PCVFPIIPAT VSFFTNQQGG QWKALLYGAF IIGIYVLIGT VVSRFNGPAF
ANFVSTHWLP NILFFAIFFI FGLSFLGLFE IVLPNSLINK ADAKSEQGGI AGIFFMAFTL
VLVSFSCTGP IVGSLLVASA GGEVVKPILG MAAFSSAFAI PFTLFAAFPQ WLKNLPRSGG
WLNSVKVVLG FLELALALKF LSIADQVYHW GLLDREVFLS LWIVIFALIG FYFLGKLRLP
HDSETKYISV QKLLLAIVTL SFVVYMIPGL WGAPLKALSG YLPPETSQDF NLTNAQVAAS
PANALGETPK YANLFHLPHG LQGFFDYKQA LAYSKKVNKP IFIDFTGHGC VNCREMEARV
WSDPAVMSRL QNDFVILALY VDDKTELPEA DWYTSTYDQK VKKTIGAQNA DLQITKFNNN
AQPHYCLVNS EGKLLVSPKN YDRDISHFVA FLDSGKAKF
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