Gene Slin_4950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4950 
Symbol 
ID8728714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6034339 
End bp6034977 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content53% 
IMG OID 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_003389727 
Protein GI284039797 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.203665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAA GAGATGCCCT CATGCGGGTG GCCGCCCTGG CTGGCTCAGC AATAGCGCTG 
CCCGCTTTGG CCGATACGCT CGAAGCTTCG GCTGCCCGAC GCGCCCTGAC GGGCAAACCG
CTTTTCTTCA CGGCCGACCA GGATGCGACC GTTGCTGAAC TCGCTGATAC TATAATTCCA
ACAACAAAAA CACCGGGTGC CAAAGCGGCC AGGGTGAATG AGGTAATCGA TATTATTCTG
AAAGACTGCT ACAAGGCAGA CGATCAGCAA CGCTTCGTGG AAGGGTTGAC CCGGACTAAC
AAACTAAGCC AGGATGCGTA TGGTAAGGCG TTTGTTCAAC TCGATCCAAC TCAACGAATT
GCGATTGTAA CAAAATTACA AACGGAGGCA AAAGACCAGC TGGCACAGAT GAATTCGAAC
AAGGCCACTG CCAAAGTCGA AAACTCACAG GCTGATCTAC AGATGCCGGA TGCAAAGAAA
CGGTACACGC CGTTCTTCAC CATGCTGAAA GACCTGACCT TAACGGGCTA CTTCACCTCG
GAGATCGGTG CTACCCAGGC GCTCGAATAC GTAGCGGTTC CTGGTCGTTA CGATGGTTGT
GTTACGCTCA AACCCGGTCA AAAGGCGTGG GCCATTTAA
 
Protein sequence
MNRRDALMRV AALAGSAIAL PALADTLEAS AARRALTGKP LFFTADQDAT VAELADTIIP 
TTKTPGAKAA RVNEVIDIIL KDCYKADDQQ RFVEGLTRTN KLSQDAYGKA FVQLDPTQRI
AIVTKLQTEA KDQLAQMNSN KATAKVENSQ ADLQMPDAKK RYTPFFTMLK DLTLTGYFTS
EIGATQALEY VAVPGRYDGC VTLKPGQKAW AI