| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4874 |
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| Symbol | |
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| ID | 8728638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5934234 |
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| End bp | 5937881 |
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| Gene Length | 3648 bp |
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| Protein Length | 1215 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | hypothetical protein |
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| Protein accession | YP_003389651 |
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| Protein GI | 284039721 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.70631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCCCG AAATCTTCAA ATTTGAACTG GCGTATCGGC TCAAACGACC CGCTACCTAC
CTCTACGCCC TGATTTTATT TCTCTTTACA TTTCTCTTCG TCATCTACGG CAATGGACCC
GCGTCGGAGA AAACGAATAT CAACTCACCC TATGCCATCA GCCAGTTTGT GGTTGTTATG
ACCATTATCG GGATGCTGAT TGCTTCTGCC GTGATGGGCG TGCCGGTCTA CCGTGACATT
GAGCACAACA CGAAAAACTA CTTTTTTACC TTCCCCATCA CCGAAAAGGG CTACGTCCTG
GGGCGTCATC TGGGTTCCTT TGTCGTGCTG CTGGGCATTA TGGCCGTTGG AATGCTGGGC
ATCGTGATCG GGTCGCTGCT TGGTCCGATC TTCAATCTGG CCGATAATAC CGAACGTTTC
GGGCCGATTC GGTTCCGCGA TTATGCCTAT CCGTTTCTGC TGTTTGTCGT ACCGAATATG
TTTCTGGTGG GCAGCATTTT CTTTGCGCTT GTGGCCTTTT CGCGGCAGGT GTTTGCCACG
TATGCAGGTA GTATTCTGCT CTTTATTGCC TATCTGCTGG GCTCGACGCT ATCGCAGGAT
CTGGAGAATA AACAGCTCGT TAATTTGATG GACCCCTTTG GTACCTACGC CTACGATGCC
GCTACCAAAT ACTGGTCGCC AGTGGAGCAG AACGTGCTGT TGGCCCCGCT GGAGGGCGAT
TTGCTGACCA ACCGGCTCAT TTGGTTTGGG GTGGCGCTGC TCGTCTTTTT CGGAACCCTG
CTCCGGTTTG ACTTCTCCCG TTTTCTGGCC GTTAAGCTCG GCAAGGCGCA GAAGGACGAT
GTGGCAGGTA AAGGCGTTCC ATCATTGGCG AGTCTGCCCG TAGTCACGCC CGTTTTTCAG
GCCAGCACCT ACCTTCGGCA GATGTTCAGG CAGGCGCGTA TCGAATTCGC CAATATTGTC
CGCGACCCGT ATTTCATTGC CATTTTGCTC GGTGCTGTCC TGTTTTTGTT TCTGGATGGC
TGGTTTGGGG TCGAAACCTA CGGTACACCC TCGCTGCCAA CGACCTACGC CATGCTCGAA
GCCCGCAACG GCACATTTTT CTTCTTTGTA CTTATCGTTT TGATTTTTTA CACAGGCGAG
GTGGTGCACC GGGATAAAGT CGTTCACTAC GACACCATTG CCGACGCGCT GCCCGTACCC
GACTGGATGA ATTACGGAGC CAAACTGCTG TCGATGATCT ATATCTGCCT GCTGCTCTGC
GGACTCATTT TGGTGTCGGG TGTATTGAAT CAGACGGTAA AAGGGTATTT CAACTACGAG
TTCTCGCTCT ACTTCCGCGA CCTGCTGGGC ATTGCCTTCA CGCAGTATTT TCAGTTGGTC
ATGCTGGCGT TTTTTGTGCA TACGATGGTC AACCAGAAGT TTGTCGGGCA CATCGTTACG
CTGGCGGTGT ATATCGTTAT CTGGGCCGTA CCGCAGTTTG CCGATTTCAA TTACAAGCTG
GCCATTCCGT TTTCGGGTGG CGGGGTTCAG ATTTCGGATA TGAACGGGTT TGGGCATTAT
CTGGCCAGTA TCGCGTCGTT CCGGCTGTAC TGGTACGCGT TTGGCGGAAT ACTGCTGGTG
CTGGCCCTGT GGTTCTGGAA CCGGGGTGCC GATACCAGTT TCAAAGCTCG TTGGCAACTG
GCCCGGCAAC GGATGGGGCG TGTGTCGATG GCGTTGTTTG TGGTGCTGCT GCTGGCATTC
GTAAGCATGG GTGCCTGGAT TTACACCAAT GTGAGCGTGA AGAACCGCTA TTATACCATC
GATGAACAAC GCGAGCAGCA GGCGTCGGTT GAAAAAAAAT ACCACAAATA CGCGAATGTA
CTACAGCCCA AAATCACCAG CGCAAAGGTA AACGTCGACA TCTATCCCGA GGAGTTCAAG
GCTGTGGCAA CGGGGGCATT TCTGATGGTC AACAAAGGCG ATCAGCCTAT CGACTCGCTT
CACCTGACCA TTCCAACCGA TAATTTCCAT CGGAAACTCA CCCGGTTTTT AGTCAATGGA
AAAGCACCGA GTCTGCTCGT CAATGATACA GAACAGGGCT ATTATATCTA CCGATTACCC
AAACGGATGA ACCCCGGCGA CACCGCCCAT CTGGATATGG ACGTGATGGG TGAATACCTC
GGGTTTCCCA ACGGTGGCGA CAGTCGCGAT GTTGTGGCCA ACGGTACGTT CTTCAACGTG
GGTATATTCC CGGCTTTTGG CTACAATCAG GATGCTGAAT TGAGCAGCGA TAAATACCGT
AAGAAATATA ACTTACCCAT AAAAGAATGG ACAGCACCCG CGCAGAACGA TCCGCGTGGT
CTGCGCGACT TTCTCTTCAC CGACGATGCC GACTGGGTCA CGTTCGAAGG CACCATCTCC
ACGTCGCCCG ACCAAACGGC GATTATGCCC GGCGAGTTGC TGAAAACCTG GACGAAGGCC
GGGCCGGATG GTAAGCCCCG CAAATATTTC CAGTACAAAC TCCCGGGTTT CTCCGACTAT
TTTTTCAGCA TGTGTTCGGC TAAATACGGC GTCAAACGGG ATAAATGGAC TGGTGCCGAT
GGACAGACGG TGGCGCTGGA AATCTATCAT CACCCCGGCC ACGACAAAAA TCTCGACCGG
TTTATGACCA GTATGAAGGC ATCGCTGGCG TATTACACCA AAAACTTTGC GCCCTATCCA
TACCCGGTAC TGCGGGTGCT GGAATTCCCC CGCTATGCCT CTTTTGCGCA GTCGTTTCCT
ACAACAGTCC CGTATTCGGA GGAGTTTGGC TGGGTGGGTG ATTTCCACGA TCCCAACAAA
ACCGACTACG CGTACTACGT AACGGCTCAC GAAGTCGCAC ACCAGTGGTG GGGCCACCAG
ATCATGCCCA GCCGGACGCG CGGTGCTAAC CAGATTTCCG AGACAATGGC CGAATACTCG
GCGCTGATGG TACTTAAACA GCGGTACGGC GCTGATGCTA TGCCGAAATT CCTGAAGTAT
AGCCTGGACA GTTACCTGCG TGGTCGGGCG AATGAAGACA AGTTCGAAGC CAATATGCTC
GATAACGACA CGCGCTCGTA TGTCTGGTAC CGGAAAGGGT CGATGCTGAT GTACGCCTTG
CAGGATTATA TTGGCGAAGA GCGGGTAAAC AAGGCCATGA ACGACTACAT GAAAGCGGCC
CGTTTCCGCC AGAAAGCGCC GTTTACTACC TCGCTCGAAT GGTACGGTTT CCTGAAAGCC
GCCACGCCCG ATTCGCTCAA GCCCTGGCTC ACGGATAACT TCGAGAAACT CACGCTCTAC
GATAACCGCA TCACCAAAGC CGAAGCTAAA CCCATTGGAA AGGGCCAGTA CCGCGTTACG
CTGCATGTAA AAACGGCAAC GGAGTACTAC GATAAAGCGG GCAAGGAAAC CGGCAAAGGG
AAAGGACCCG TCATTGCCGA TATTGCCGTA CTAACCGACG ATGGCAAGAA TAAAGACGGC
CTGACCACAA AAGTGCCGCT GCTGCTCCAG AAACGTAGCT TGCCCCCCGG CGAGCACGTG
ATTGAGGTAA CCGTAAAAGG AAAGCCCGTG AAAGCCGGTA TCGACCCTTA CAATAAATTG
ATCGACCGCG TTTCGGACGA TAACCTGGTA AAAGTAGATA TGCCGTAA
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| Protein sequence | MFPEIFKFEL AYRLKRPATY LYALILFLFT FLFVIYGNGP ASEKTNINSP YAISQFVVVM
TIIGMLIASA VMGVPVYRDI EHNTKNYFFT FPITEKGYVL GRHLGSFVVL LGIMAVGMLG
IVIGSLLGPI FNLADNTERF GPIRFRDYAY PFLLFVVPNM FLVGSIFFAL VAFSRQVFAT
YAGSILLFIA YLLGSTLSQD LENKQLVNLM DPFGTYAYDA ATKYWSPVEQ NVLLAPLEGD
LLTNRLIWFG VALLVFFGTL LRFDFSRFLA VKLGKAQKDD VAGKGVPSLA SLPVVTPVFQ
ASTYLRQMFR QARIEFANIV RDPYFIAILL GAVLFLFLDG WFGVETYGTP SLPTTYAMLE
ARNGTFFFFV LIVLIFYTGE VVHRDKVVHY DTIADALPVP DWMNYGAKLL SMIYICLLLC
GLILVSGVLN QTVKGYFNYE FSLYFRDLLG IAFTQYFQLV MLAFFVHTMV NQKFVGHIVT
LAVYIVIWAV PQFADFNYKL AIPFSGGGVQ ISDMNGFGHY LASIASFRLY WYAFGGILLV
LALWFWNRGA DTSFKARWQL ARQRMGRVSM ALFVVLLLAF VSMGAWIYTN VSVKNRYYTI
DEQREQQASV EKKYHKYANV LQPKITSAKV NVDIYPEEFK AVATGAFLMV NKGDQPIDSL
HLTIPTDNFH RKLTRFLVNG KAPSLLVNDT EQGYYIYRLP KRMNPGDTAH LDMDVMGEYL
GFPNGGDSRD VVANGTFFNV GIFPAFGYNQ DAELSSDKYR KKYNLPIKEW TAPAQNDPRG
LRDFLFTDDA DWVTFEGTIS TSPDQTAIMP GELLKTWTKA GPDGKPRKYF QYKLPGFSDY
FFSMCSAKYG VKRDKWTGAD GQTVALEIYH HPGHDKNLDR FMTSMKASLA YYTKNFAPYP
YPVLRVLEFP RYASFAQSFP TTVPYSEEFG WVGDFHDPNK TDYAYYVTAH EVAHQWWGHQ
IMPSRTRGAN QISETMAEYS ALMVLKQRYG ADAMPKFLKY SLDSYLRGRA NEDKFEANML
DNDTRSYVWY RKGSMLMYAL QDYIGEERVN KAMNDYMKAA RFRQKAPFTT SLEWYGFLKA
ATPDSLKPWL TDNFEKLTLY DNRITKAEAK PIGKGQYRVT LHVKTATEYY DKAGKETGKG
KGPVIADIAV LTDDGKNKDG LTTKVPLLLQ KRSLPPGEHV IEVTVKGKPV KAGIDPYNKL
IDRVSDDNLV KVDMP
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