| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4861 |
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| Symbol | |
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| ID | 8728625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5919245 |
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| End bp | 5920246 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_003389638 |
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| Protein GI | 284039708 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000181011 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.977558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCC CCCTAACAGG TTCTCCGATG GAATTGAGGA CTAGGCCAGA GACGCGATTT
TTTCGCCGTG AGCCATTCCA GATTGTCCAT CACTTCTACT TGTGTGAGGA GACTGGCGAG
GAGTTCACCG ATGAGCATAC GGACTCAGTC AATCAAAAGC AAGTGCTCAA TCAATACAGG
GTAGCTCATA ATTTGCCATT CCCCGACGAA ATTGCTGCGA TTCGGACAAA ATACGGCTTA
TCGGCAAGCA AGATGGCAGA GGTTCTTGGC TTTGGAGTTA ATAGCTATCG ACAATATGAG
ACAGGTGAAA TTCCATCTGA CTCAAATGCT CGACTGATAC AGTTAGCTAA AGATCCTGAA
GAATTTAAAA AGCTAATCTG CATCAGCGGA GTACTGGAGG AACAGGAACA GGAAAAATTG
CTATCAAAAA TTGATCAGTT GATTTTTGAA GAGAGACGCA ATAAACCTGT CAACTGGGTA
AGTGAATATC TCTTCGGCAG CTTACGACCT AGCCAGTACA CTGGTTATCG ACGCCCTAAC
GTGGAGAAGT TTGTGTATAT GACAATGTTC TTCGCGGAGA AGACTAAGCC TTATAAGACT
AAGCTTAATA AGTTGATGTT CTATGCAGAT TTCCTTTGCT TTAAGCGACA TCAAATGTCA
ATATCGGGAG CTACCTATCG GGCTATCCAA CTAGGACCGG TTCCAAATAA CTATGATGCG
TTGTATGCAC ACGGTGTAAA AGAAGACTTA TACCGGGTAC ATTATGAAGA ATTTGACAAT
CGTATAGGAG AACAATACTG TTCGTGTGAA CACGTAGCAT TCCGGAATGA ATTGTTCAGT
AACGAGGAGT TGGCTGTACT TGAGGAGGTC GTCAAACGGT TTTACTCTGC CCGCACCAGT
GACATTGTTG GTATTAGCCA TGAAGAGCGT GCCTGGACTG ATCATGAAGG TCAGCACGAG
AAAATTGATT ATAAGTATGC GTTCGACTTA AAAGCCGTTT AG
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| Protein sequence | MNSPLTGSPM ELRTRPETRF FRREPFQIVH HFYLCEETGE EFTDEHTDSV NQKQVLNQYR
VAHNLPFPDE IAAIRTKYGL SASKMAEVLG FGVNSYRQYE TGEIPSDSNA RLIQLAKDPE
EFKKLICISG VLEEQEQEKL LSKIDQLIFE ERRNKPVNWV SEYLFGSLRP SQYTGYRRPN
VEKFVYMTMF FAEKTKPYKT KLNKLMFYAD FLCFKRHQMS ISGATYRAIQ LGPVPNNYDA
LYAHGVKEDL YRVHYEEFDN RIGEQYCSCE HVAFRNELFS NEELAVLEEV VKRFYSARTS
DIVGISHEER AWTDHEGQHE KIDYKYAFDL KAV
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