Gene Slin_4843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4843 
Symbol 
ID8728607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5894385 
End bp5894993 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content45% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389620 
Protein GI284039690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0250264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.110684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGTC AATTTGATCA ACTTTATCAT AAACTAACTG AAGTGACATT CCAGGATCCG 
GCTACCGGAA ACTTGTTTTT CCCTGTCTAT CTCTTCACCT ACACGCCAAC CGAAGAATAT
AGTGTCCGTG AACAAATCTC AGCCTTAGGC GAGCGACTCC TTCGACCCTA TGGTCAGAAT
GAAGTACTCG TACTTAATCT ATTCGATGCA TTTCTGGACT ACCTACGGGC TGACGACTAC
GGCGATGAGA CTTTACTGGA CATCCTGCTT GATAAAGAAC GTCAGGAAGG CTATTTAGGC
GATATTGACG AGTTACTTCG TAAAAAAGCG GGTGAGGAGG AGTTTATCAG CTTTGTGGCC
CATCGTATTC GCACGTACCT GAATTTGCCC TCTCAATTTC CACGTGTTTT CGTTCTCCTG
CACGGTTTTG GCAGTCTGTT TCCCTTATTA CGGGTTAGCA CTTTTCTCAA CAAGTTCGAG
CGGCATGTCG TCGGCTTTAA ATTGATTGTC TTTTACCCAG GTACATACCA ACATCAACGC
TACGTACTTT TCAACCAACT CCACGATGAA CATTTGTATC GTGCTATCCA CCTGAACGCC
TTGCTCTAA
 
Protein sequence
MTGQFDQLYH KLTEVTFQDP ATGNLFFPVY LFTYTPTEEY SVREQISALG ERLLRPYGQN 
EVLVLNLFDA FLDYLRADDY GDETLLDILL DKERQEGYLG DIDELLRKKA GEEEFISFVA
HRIRTYLNLP SQFPRVFVLL HGFGSLFPLL RVSTFLNKFE RHVVGFKLIV FYPGTYQHQR
YVLFNQLHDE HLYRAIHLNA LL