| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4824 |
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| Symbol | |
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| ID | 8728588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5877879 |
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| End bp | 5880953 |
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| Gene Length | 3075 bp |
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| Protein Length | 1024 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | histidine kinase |
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| Protein accession | YP_003389601 |
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| Protein GI | 284039671 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0714049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.112759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATC ACCCTTACTA CTCACGACTC ATCCGCCTAT GTCGGACCGG GTTCATGTCT
CTGCTTTTTA TTAATGCCTT GCCGCTGGGT AGCTGGGGGC AGTCTACCCT AATCTTTGAC
CACCTGTCAA CCGCTCAGGG ACTTTCTCAA AGTACAGTTC GAAGTATTTG CCAGGACAGG
GAAGGGTTTA TGTGGTTTGG CACCCATGAC GGCCTAAACA AGTACGATGG TTATTCCTTT
ACCGTATTCA AAGCGGATCC GAACGACCCG CAGAACACCC TACATCATAA CATCATCACG
GATATCCATG AAGATCGGAA GGGACGATTG TGGGCGGCTA CCCTGGGGGG AGGCTTGCAT
CAAATTGATA AACGAACGGG TCAAGTAACC GCCTTTGAAC TGGGGCGGAA TCGGGAAAAT
GCCTGGAACA CGTTGTTTTC CATCCATGAG GATCAAACAG GGGGACTCTG GGTAGCCAGC
GGGGGGGGGC TGGCGCGCTT TGATCCCGCC ACCCGCCGGT TTACCCGGTA TGCCAAACCC
GCTTATCCGG TGGCGATTAC CCAGGATGCT TCCGGAAACT ACTGGGTGGG TGGTATACAG
GGCGTAAGCC GGTTCGATCC CCGCACGGGC ACCTTTACGG CGATTAACAT CCGGAATGGA
CAATTTAAAC AGCCCTTTAT CTCCTCTTTA TTGCTTGACA GCAAAGGAAT TCTATGGGCG
GGTAGTCTGG AAGGGGGCGT GTGGCGTCTG GATGCCGGAG GGACTCCTCT GCGGTTTACC
CGGTACAACC CCAGGGGGCT ACTCACAAAA TCGATCCGAT ATAATGGGAT TTATGCCAAT
CGACGGGGAG AGGTTTGGCT GGCAACCGGC GAGGGTTTAC AACGGGTTGA CCCAAACACC
GATCAGGTCA CTACCTATAC GGAAGATCGA TCGGTCCCGG GTAGCCTAAG TAATAACAGT
ATCCAGTCCC TGTATGAAGA CCGGACGGGA TCGTTTTGGG TTGGCACCAA CCATGGTGTT
AACAAAACGC CGGCCTATAC GAAAGCTTTT TCGGCTTATC AGATCATTCC GACATTAGCC
TCCACAAGTT TAAATCATAA CTACATCAAT ACGTTACTGG AGGACCATAC AGGCACGCTC
TGGCTGGGCA GTAGTGCCGG TAGTATGGAC GGAAGCTTTC AACATGACTT AGTCGCGGCA
AATCCAGTTC AGCTCCACAG TAACCAAAGG GGCCCCTTTA AGTCAGTTGC GTCCCTGGCC
AAGCAAAAAG TATGGACGCT GTACGAAGAT CGCCAAAAAC GGCTGTGGGC GGGTACCGAG
AAGGGTTTGT ATCAGTATCA ACGGGCCATG GGCCACTTCA AGCGATACCC CTTCCCCTTT
TCGGTTCGCT GTATTGTCCA GGATTCAGCA GGAATCTTAT GGGTGGCCAA TCATAGTGCC
GGAGACACGA CCGTCATTGC GGCTTTGGAT CTTACCCATT CCCGCTCGAC CTACTATTAT
CACCACCCCG GGAATACCGC TGGATTGAAC AATGCGTTTA TTTACCAGCT ACTGGCCAGC
CGCAGCGGGG ACATCTACGT TGCAACCGGG GGAGGGGGTA TCAATCGGCT CAATCCCCGA
TCAGGGCGAT TTATACATTA CCTGCCTGCC TATGAGTCCC GGGCTTCTCA CTTGAATGAC
AAAGAGATTC GATGCCTCTA CGAAGATCAC CAGGGGATGA TTTGGGCGGG CACAGGACTG
GGCGGTTTAA ACCGACTGGA TCCCCGGACC GGTAGGGTTC AGGTTTATAC TACCCATGAG
GGACTGCCCA GTAATCGAAT TCTTAGTATC ATTGATGATG ATCAGGGTAA TTTATGGCTA
GGGACGGCGC GGGGGCTTAG CCGCTTCGAC CGGATTACCC AGCACGTTCG CAATTACGAG
CAAAGGGATG GGTTGCCCGA TGACGAGTTC AATACGGGCG CCGTTTATAA ACGGCAGGGC
AGACTCTGGT TTGGTACTCG TAATGGATTT TTTGGGTTCA ATCCTGATAG CATTCAGGAC
AACACAACCC CTCCCTCGGT TTACATCACC GGTTTAACGG TGATGAACCA AAGGCGCCCC
CTGCCCCAAC GGCAACTGAC GCTGGCACAT GACGAAAACT TTTTAACCAT TGAGTTTGTG
GCGCTGAACT TTCATCGGCC CGAGAAGAAT CAATATGCGT TTCAACTAGT GGGCTTAGAT
AAACAGTGGG TGTTCAGCAA TGCCCGACGG TTTGCGAGCT ACACCAACCT GGCTCCCGGG
CACTACCGAT TTCGAGTAAA AGCGGCCAAT AATGATGGGG TATGGAATCA AACGGGTACC
TCTTTCGGGC TAACCATTGA GCCGCCTTGG TGGCAAACAA ACTGGTTTCG GCTTATGGCC
CTAATCAGTT TACTGTTGGG GATGGGGATA ACCATTCGGT TCTACACCCG GGTCAAACTG
CGCAGGCAAC GGCATGAGTT AAAGAAAGTG CTCCAGGCTC AGGAGGAAGA ACGGCAACGG
CTGGCAGCGG ATCTCCACGA CGATCTGGGG GCGACACTGT CGACTATTAA AGGACAGCTG
GAAACATTAC CGTCTTTAAG GCAAGAATTA GAGATGCCTA TCCGTCTGAT GGGAAAGGCC
ATTGGTGATC TGCGTTTTAT CTCCCATAAC CTGATGCCGC CCGAGTTCAG CCGGCTGGGC
CTGGCGGAAA TTCTGGGCGA AGCCATCAGA CAGCGGCAGG TCAGTTCAAC CCCTGTTTTT
CTCTTCGTTA CCTTTGGGCA ACAACGTCGG CTCGATTTGG AAACCGAACT CATCGTCTAT
CGCATCGCCG TTGAACTCAT CAACAATGCC CTTAAACATG CCCGGGCGCG ACACATCACA
GTACAGTTGA TTTTCCATCC CGAACAAGTA TGCCTGCTGG TGGAAGATGA TGGCCTCGGC
TACTTAGCCT CACACCGCCC AGCCGCCGGA GCCGGACTGC GCAATATCCG CTCCCGGGCT
GCCTATCTAA AAGGGGACCT AGTGGTAGAT TCCAACCCTA GAGGCACGAT GGTCACGTTA
ACTATCCACT ACTAA
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| Protein sequence | MDNHPYYSRL IRLCRTGFMS LLFINALPLG SWGQSTLIFD HLSTAQGLSQ STVRSICQDR
EGFMWFGTHD GLNKYDGYSF TVFKADPNDP QNTLHHNIIT DIHEDRKGRL WAATLGGGLH
QIDKRTGQVT AFELGRNREN AWNTLFSIHE DQTGGLWVAS GGGLARFDPA TRRFTRYAKP
AYPVAITQDA SGNYWVGGIQ GVSRFDPRTG TFTAINIRNG QFKQPFISSL LLDSKGILWA
GSLEGGVWRL DAGGTPLRFT RYNPRGLLTK SIRYNGIYAN RRGEVWLATG EGLQRVDPNT
DQVTTYTEDR SVPGSLSNNS IQSLYEDRTG SFWVGTNHGV NKTPAYTKAF SAYQIIPTLA
STSLNHNYIN TLLEDHTGTL WLGSSAGSMD GSFQHDLVAA NPVQLHSNQR GPFKSVASLA
KQKVWTLYED RQKRLWAGTE KGLYQYQRAM GHFKRYPFPF SVRCIVQDSA GILWVANHSA
GDTTVIAALD LTHSRSTYYY HHPGNTAGLN NAFIYQLLAS RSGDIYVATG GGGINRLNPR
SGRFIHYLPA YESRASHLND KEIRCLYEDH QGMIWAGTGL GGLNRLDPRT GRVQVYTTHE
GLPSNRILSI IDDDQGNLWL GTARGLSRFD RITQHVRNYE QRDGLPDDEF NTGAVYKRQG
RLWFGTRNGF FGFNPDSIQD NTTPPSVYIT GLTVMNQRRP LPQRQLTLAH DENFLTIEFV
ALNFHRPEKN QYAFQLVGLD KQWVFSNARR FASYTNLAPG HYRFRVKAAN NDGVWNQTGT
SFGLTIEPPW WQTNWFRLMA LISLLLGMGI TIRFYTRVKL RRQRHELKKV LQAQEEERQR
LAADLHDDLG ATLSTIKGQL ETLPSLRQEL EMPIRLMGKA IGDLRFISHN LMPPEFSRLG
LAEILGEAIR QRQVSSTPVF LFVTFGQQRR LDLETELIVY RIAVELINNA LKHARARHIT
VQLIFHPEQV CLLVEDDGLG YLASHRPAAG AGLRNIRSRA AYLKGDLVVD SNPRGTMVTL
TIHY
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