| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4799 |
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| Symbol | |
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| ID | 8728563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5851721 |
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| End bp | 5853412 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003389576 |
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| Protein GI | 284039646 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACGT ACATAAACAC CTTACTCCTG TCGGGATTAT CAGTAGGGGC TCTGGCGCAA
GCCCCCGCTC CCGATGCAAA CACCCTGATG AATCTTGGTC AGTTTGCGGA GGCCAAGCAA
TTGCTGAACC GAAATGCTCA GCAGAGTCCG TCAATGCAAA GTCTGTTCGA CGCGGGCTAC
GGTTATCTGC GTTCAGGTCA GCCCGATTCG GCCCGTATCT GGTTTACCAA AGGCCTGTCG
ATGGATGAGA AGCGCACGCC ACTCAACGAA ACCGGCGTGG CTATCAGCTA CCTAGTGGAA
AACAATGCAG CCAATGCCGA ACCTAAACTG GCAGAAGTGC TTAAAAAGAG TAAAAGTAAA
AACGCCGACA TTCTGTATCG AATTGGCGAA GCCTACACGG GCTACCTGAC CCCCGGCAAT
GGGTCCATCA AACCCGTCTA CGTCAAAGCG GTCAATGCCG CCAAGGCCAT CGACTACCTC
AACCAGGCTA CCGAACGCGA CAAGAAAAAC GCAGCGATTC AACTGGCCCT CGGCGATGCC
CATTATCTGA ACAAGGATGC CGGTACGGCC GTTACCCGGT ACGAAAGTGC GCTTGAACTG
GGTATGAACC CATCGCGGGT GTATCAGCGC ATCGGCGATA TTTATTGGCA GGGACGCAAC
CTGAATCTGG CCGTGGAGAA TTACAAAAAA GCCATTGAGG CCAATGCTGC CTACGCTCCG
GCTTACAACC AACTCGCCGA ACTGTATTTT CTGGTCAACC GCTACAAAGA AGCGGCCAGC
TACATTGACC AGTACGTTCG GGTTTCGCAC GATGCCCGGC AGGAAACACT GCTGCGTCAG
GCACAATTCC ATTTTCTGGC TAACGATTTT CAGCGAGCCG TTACACTCAT CGACAGCAAC
CGGACGGCAC TGGGCCAGAA CCCCATTGTT TACCGCATAA AAGGCTGGGC GTACTCGTCG
CTCAAACAGC CCGATAAGGC CATCGAGAAC ATCAACACGT TCCTGGAAAA AGCACCGGAC
AAAGCCATGC CCGACGATTA CAAGTACCTC GGCCGGGCGT ACATGGCCAC CGACAGCACT
AGCGATGACT CCTTGGGTGC GGTCTACCTC GCCAAAGCCG CCCCTTTCGA CACGACAGAC
AACCTGTACA GCGACATCGC CAAATATTAT TACCGGGCCA AAAAGCACCC CGAAGCGGTC
GCCATTCTGG ACTCGGCAGC GAAGCACGGC TTCAAAGCCG ATGTGCAGGA TTTGTTTCGG
TACGGCATGA GTAACTACAC CCTCGGGTTC AAACGGGATA GTTCGGGTAA ACTCGAACGC
GACACCCTCC GGTTCGCCCT GGCCGATTCG GCGCTGGCAC TGGCTCAACA AGGCTCACCC
GAGTACGCCC CAACGGTACT GTACCGGGCC AAAGCTAATT ACTACGCCTA CGCACCCGAA
GAAGCGGTGA TGAAGGGCAA AGCCAAACCC TACTTCGAGC AATTCATCAG CATGATAGCC
GATAAGGAGG AAGAACGGAA TCGGTACAAA AAGGACTTAG TACTGGCCTT TAAATACCTG
ATCTCGTACA ATGAACTAGT CACGAAAGAT GAGGCCGCCC GCAACGAGTG GCTTACCAAA
GGACTGGCCC TATTTCCCGA AAACAAGGAT TTAGCTAAAA TAGCCGGTCC GAACGAAGCC
GATAGTCAAT AA
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| Protein sequence | MRTYINTLLL SGLSVGALAQ APAPDANTLM NLGQFAEAKQ LLNRNAQQSP SMQSLFDAGY
GYLRSGQPDS ARIWFTKGLS MDEKRTPLNE TGVAISYLVE NNAANAEPKL AEVLKKSKSK
NADILYRIGE AYTGYLTPGN GSIKPVYVKA VNAAKAIDYL NQATERDKKN AAIQLALGDA
HYLNKDAGTA VTRYESALEL GMNPSRVYQR IGDIYWQGRN LNLAVENYKK AIEANAAYAP
AYNQLAELYF LVNRYKEAAS YIDQYVRVSH DARQETLLRQ AQFHFLANDF QRAVTLIDSN
RTALGQNPIV YRIKGWAYSS LKQPDKAIEN INTFLEKAPD KAMPDDYKYL GRAYMATDST
SDDSLGAVYL AKAAPFDTTD NLYSDIAKYY YRAKKHPEAV AILDSAAKHG FKADVQDLFR
YGMSNYTLGF KRDSSGKLER DTLRFALADS ALALAQQGSP EYAPTVLYRA KANYYAYAPE
EAVMKGKAKP YFEQFISMIA DKEEERNRYK KDLVLAFKYL ISYNELVTKD EAARNEWLTK
GLALFPENKD LAKIAGPNEA DSQ
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