Gene Slin_4779 details

Gene Information

• Locus tag: Slin_4779
• ID: 8728543
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: +
• Start bp: 5818545
• End bp: 5822033
• Gene Length: 3489 bp
• Protein Length: 1162 aa
• Translation table: 11
• GC content: 57%
• Product: membrane-bound dehydrogenase domain protein
• Protein accession: YP_003389556
• Protein GI: 284039626

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 37
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACGTCA TGAACGCTTC CCGCCCCCTG CGTTTCTTCC ATAAGTTTCT TATGATCAGC 
GCCGTTCTGC TCGTCACCTC GGCCGCTAAC CAGGACAACC AAAACGATAT TCCAGACCCC 
GACCCGAAAC GTGAGCTGGC TTCCTTTAAA GTGGCCGATG GCTTCGAGGT AACGCTCTTT 
GCGGCCGAAC CGCTGGTGGC CAAACCCATC CAGATGAACT GGGACGCCGA CGGCCGCCTG 
TGGGTGGTGA GCAGCACCGC TTATCCGCAC CTGAAAACGG GCGAACAGGC CAACGACAAG 
ATTTTCGTCG TGGAAGATAC CGACGGCGAC GGCAAAGCAG ACAAGTCGAC CATTTTTGCC 
GAAGGACTGC TCACCCCCAC CGGCATCCTG CCCGGCGATG GTGGTGTGTA TGTGGCCAAC 
TCCACCGAAA TCCTGCACTT CATGGATACG GATGGCGATG GCAAAGCCGA CAAAAAACGC 
CGGATTCTGA ACGGATTCGG CACGGCTGAT ACGCACCACC TCATCCATAC GTTCCGCTGG 
GGTCCCGAAG GGCTGCTGTA TTTTAACCAG TCCATTTACA TTTACAGCCA CGTTGAAACG 
CCCTCGGGCA TCAAACGGCT GGAAGGCGGT GGCGTCTGGC AGTTGAATCC CAAACACCTC 
GAACTGGACG TTTACGCCAA AGGACTCATC AATCCGTGGG GGTTGCAGTT CGACCGTTGG 
GGGCAATCCT TCCTGACGGA TGGTGCCGGG GGCGAGGGCA TTAACTACGC CTTTCCGGGG 
GCTACGTTCG TCACTTCACC GGGGGCAGCC CGCATCCTGC GTGGCCTGAA TCCGGGGCAG 
CCGAAACATA GCGGACTGGA AGTAATTTCG GGTCGGCACC TGCCAGAATC CTGGCAAGGA 
AGTGTGATCA CCAACGACTT CCGGGCCAAC CGCATCAACC GGTTCCGGCT GGAAGAACAA 
GGCAGCGGCT ATGCCTCCAA ACAAGTCGAG GATTTACTAT GGACTGACAA TGTTGCGTTC 
CGTCCCGTCG ATATTTCTGT GGGCCCCGAT GGTGCTATTT ACGTGGCCGA CTGGTACAAC 
CCGATTATTC AGCACGGCGA AGTCGATTTT CACGATCCCC GCCGGGATCA GCAGCACGGC 
CGTATCTGGC GCATTGTGGC CAAAAACCGG CCGCTGGTCA AACGCCCTCC GTTAACGAAA 
GCGTCGGTCA ACGAACTGCT GGATGCGCTG AAACTCCCCG AGGACTGGAC CCGTTCGCAG 
GCGAAACAGA TTCTGAAAGC ACATGGCGCT ACGGAAGTTA TTCCGGCGCT CGAAAAATGG 
GTACAGAATC TGGACAAAGC CGATGCTGAG TACGAACACC ATCTGCTCGA AGCGCTTTGG 
GTGTACCAGA CCCTTGAGGT GGTCAACGAG CCGCTTTTAC TACGTTTGCT GAATGCTCAA 
AGTCATAAAG CGCGGGCGGC TGCCCTGCGG GCTATGGAGC TGTGGCACAC TAAAATAGCC 
GACATGCCCG CGTTGCTTAC GAAAGCCGTG GCCGACAAGC ACCCGCAGGT ACGCATGGAA 
GCCGTTATTG CACTGCGAAA CGTGAAAACG CCCGAAGCCG CCCGAACGGC CCTGTCGGTA 
CTGGACAATC CGATGGACGA GTTTCTGGAT TACGCCCTCT GGCAAACCGT GCGGGAAGCG 
GAGCCACTCT GGGCACCCCG CCTGAAAAAA GACCCTAACT TCCTGGGCGA TGCGCGGAAA 
ACCGTTTTTG CCCTGAAATC GGCCAGCAGT CCAGAGGCCG TTACGCAGTT GAGGCAGTTG 
TATCAGCAGG GTAAAGTGCC GACCGACTAC CAGAAGGACG TGCTTGGGTC GATCGCGAAG 
TTCGGTAGTG CGGCTGATCT GGGCGGCCTG TTCGCAAAAG AGATACAGGT TAAAGGCAGT 
TCGGCTAGTG AAGTTGCCAT GGTACTCGGT ACGCTGGAAG AAGCCGCCAG CCGGGGGGTC 
AAACCAGCCG GACAACTGGA CCGGATTACG GACTTTATCG ACAGCGACGA CGACGCCATT 
GCCACCAGTG CTATCCGGCT GATTGGCCTC TGGGAGTTGA ACGACCTCAG CGGAACGCTG 
GTAAGCCTGG CTCAGAAGGG CGATAAAAAC CGTCGAAAAG CGGCCCTCGG TGCACTGACG 
ATTACGGATA AGGCCAACGC CTGGAAATCG CTGATTAATT TGACAGGCCC CAAAAGCCCG 
GTCGATCTGC GACTGGCCGC AGCCGCTCAG CTGGTGTCCG TCAATGCCAC TGAAGCCGCC 
CGGATTAGTG CCGACCTGCT ACGAACATTG CCGGAGCAAA CCGATGTAGC CGAGCTTTTC 
CAGGCATTTT TGAGCAGCAA GCCGGGCACC AAAGCTTTAT CGGATGAACT AACCGCCCGA 
AAAATTCCGG AGAAATGGGC CATGACCGGT CGGCAGCTCA TGCAGCGTGG CGTACCGTAT 
AACCGGCGCA ACGATGCCGA CGTCAAGCTA CTGGCCAAGG CATTTGAAGC ATCGGGAGGG 
GTTTTGCCCG CCGAAAAAAT GCCGCAGGAA TTATCGGCGC AGGAGATCAC CAGCCTGGCC 
AGCGTTGTCA GAGAGAGTGC CGACCCGGTG AAGGGTGAAA TGATATTCCG AAAGAGCAGC 
CTGTCGTGCC AGACCTGCCA TGCCATCGGC GGTGCCGGGG GACGAATTGG ACCGGATCTG 
AGCAGTCTGG GCACGAGTTC GCCCATCGAA ACCATCACCC GGTCTATCCT CTACCCGAAC 
CAGTCTATCA AGGAAGGCTA CGAGCTACAG CGCATTGCCA AAAAAGACGG TAGTGAATTG 
ATGGGCTATC TGGTAAGCAA CGGCACCGCC GAGCTGGTGA TCCGCGATGT GTCAGGACAG 
GAAGTGTCGG TTCCCAAGAG TCAGGTGAGC GTTATCGAGA AAGTACCGGG TTCGCTGATG 
CCCGCAGGAC TGACGGCCAG TCTGGACAAA CAGGAGTTTA TTGATTTGGT GGGCTTCCTG 
TCGAAAATGG GCGAATCGGG CAAATTCCGG GTGCCAACTG AGCGGTTTGT GCGTCGCTGG 
AACGCCGTTT CGACCAGTAA AGATCTTGCC AAAAAGCTCC GGGACGAAGG ACTGGGCGCT 
GTTGCGAAGG AAAACACCAA GCTCACCCTG CAATCGGCTT ACAGTAAAGT GTCCGGCGAG 
TTGCCAGTTG ACGAACTACC CGTCATTACG AACGCGAATA AGCCCTACAG CATCGTCCGG 
TTCGATCTGG AAGTGGTGAG CAAAGGCAAC GTGAATCTGG CCCTGAACAA CACAGCCGGT 
ATCAGCGCCT GGGTCGATCA GAAACCCGGC AAACTAACCG ACCGGGGCCT GCTTACCGAT 
CTCTCGCAGG GAATGCACAC CATTACGCTG GCCATTGATC GAAGCGTTTA TAAAGCCAGT 
TCGCTCCACG TTCAATTGCT TGACGCGGAG AACGCTCCGG CTCAGACGAG GCTCGTCATG 
GGTCGTTAG 

 

Protein sequence

MNVMNASRPL RFFHKFLMIS AVLLVTSAAN QDNQNDIPDP DPKRELASFK VADGFEVTLF 
AAEPLVAKPI QMNWDADGRL WVVSSTAYPH LKTGEQANDK IFVVEDTDGD GKADKSTIFA 
EGLLTPTGIL PGDGGVYVAN STEILHFMDT DGDGKADKKR RILNGFGTAD THHLIHTFRW 
GPEGLLYFNQ SIYIYSHVET PSGIKRLEGG GVWQLNPKHL ELDVYAKGLI NPWGLQFDRW 
GQSFLTDGAG GEGINYAFPG ATFVTSPGAA RILRGLNPGQ PKHSGLEVIS GRHLPESWQG 
SVITNDFRAN RINRFRLEEQ GSGYASKQVE DLLWTDNVAF RPVDISVGPD GAIYVADWYN 
PIIQHGEVDF HDPRRDQQHG RIWRIVAKNR PLVKRPPLTK ASVNELLDAL KLPEDWTRSQ 
AKQILKAHGA TEVIPALEKW VQNLDKADAE YEHHLLEALW VYQTLEVVNE PLLLRLLNAQ 
SHKARAAALR AMELWHTKIA DMPALLTKAV ADKHPQVRME AVIALRNVKT PEAARTALSV 
LDNPMDEFLD YALWQTVREA EPLWAPRLKK DPNFLGDARK TVFALKSASS PEAVTQLRQL 
YQQGKVPTDY QKDVLGSIAK FGSAADLGGL FAKEIQVKGS SASEVAMVLG TLEEAASRGV 
KPAGQLDRIT DFIDSDDDAI ATSAIRLIGL WELNDLSGTL VSLAQKGDKN RRKAALGALT 
ITDKANAWKS LINLTGPKSP VDLRLAAAAQ LVSVNATEAA RISADLLRTL PEQTDVAELF 
QAFLSSKPGT KALSDELTAR KIPEKWAMTG RQLMQRGVPY NRRNDADVKL LAKAFEASGG 
VLPAEKMPQE LSAQEITSLA SVVRESADPV KGEMIFRKSS LSCQTCHAIG GAGGRIGPDL 
SSLGTSSPIE TITRSILYPN QSIKEGYELQ RIAKKDGSEL MGYLVSNGTA ELVIRDVSGQ 
EVSVPKSQVS VIEKVPGSLM PAGLTASLDK QEFIDLVGFL SKMGESGKFR VPTERFVRRW 
NAVSTSKDLA KKLRDEGLGA VAKENTKLTL QSAYSKVSGE LPVDELPVIT NANKPYSIVR 
FDLEVVSKGN VNLALNNTAG ISAWVDQKPG KLTDRGLLTD LSQGMHTITL AIDRSVYKAS 
SLHVQLLDAE NAPAQTRLVM GR