Gene Slin_4762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4762 
Symbol 
ID8728526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5800442 
End bp5801341 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content49% 
IMG OID 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_003389539 
Protein GI284039609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCGC TAGCCCTTCA TCCCCAACTA ATAGTAACAA TTTTAAACTC AACCCAAATG 
CGTATACTGA TTTTCGTTTT ATTAAGTAGC CTGATGCTTA CTCAGACCAC TTTTGCCCAA
AAAGATACAC CCATCAACGT GGCGACCTAT AACCTCCGCT ACAACAACAA AGGCGACGGT
ATCAATGCCT GGCCGAATCG GAAAGAGAAT GTGAAAGCCC TGATCCGGTT TCACGAATTC
GATCTGTTCG GAACGCAGGA AGCACTGCGC GATCAGTTGA ATGATGTAGC CGAACTGAAT
GAGTTCGCGT TTCTGGGTGC CGGTCGCGAC GATGGGAAAG AAGCTGGAGA ACACTCAGCC
GTTTTCTACA GAAAAGATCG ATTTAAGCCT TTGCAGTCGG GCAATTTCTG GCTAAGTGAA
ACGCCCGACA AACCCGGCAA AGGCTGGGAT GCTACCTGCT GCAACCGCAT CTGCTCGTGG
GCGAAATTCA ATGACCTGAA AACGAAGAAA GACTTCTATT TTTTCAGCGT TCACTTCGAT
CATCAGGGCG TAGAGGCCCG TCGGCAGTCG GGTAAGCTTA TGGTGGAGAA GATAAAGGAG
ATAGCGAAGA ATACACCCGT TATCCTCGTC GGCGACTTGA ACTCAACCCC CGACACGGAG
CAGGTAAGAA CCATCAAGAC GCTGTTAAAC GACGCGCATG ACGTAACAAA AATGCCGCCC
TACGGCCCGG AGGGCACCTT CAACAGCTTT AAGTTCGACG CGCCTATGGA TAACCGCATC
GACTACATCT TCACCAGTAA GCAATTCGAT GTGCTGAAAT ACGGTGTGCT AACCGATGCC
AAAGAGCAAC GTTACCCATC CGATCACCAG CCAGTAGTGG CCAAAGTTGT ATTGAAATAG
 
Protein sequence
MLALALHPQL IVTILNSTQM RILIFVLLSS LMLTQTTFAQ KDTPINVATY NLRYNNKGDG 
INAWPNRKEN VKALIRFHEF DLFGTQEALR DQLNDVAELN EFAFLGAGRD DGKEAGEHSA
VFYRKDRFKP LQSGNFWLSE TPDKPGKGWD ATCCNRICSW AKFNDLKTKK DFYFFSVHFD
HQGVEARRQS GKLMVEKIKE IAKNTPVILV GDLNSTPDTE QVRTIKTLLN DAHDVTKMPP
YGPEGTFNSF KFDAPMDNRI DYIFTSKQFD VLKYGVLTDA KEQRYPSDHQ PVVAKVVLK