Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4758 |
Symbol | |
ID | 8728522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5792944 |
End bp | 5794263 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | signal recognition particle protein |
Protein accession | YP_003389535 |
Protein GI | 284039605 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.259533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTGAGA ATCTTCAGGA TAAGCTAAAT AAGGCCATCA AAACCCTAAA GGGACAGGGC CGTATCACAG AAATTAACGT TGCTGCGACG ATTAAAGAAG TTCGTCGTGC GCTCACCGAT GCCGACGTTA ACTATAAAGT AGCCAAAGAT ATTACGGACC GTATCCGCGA TAAGGCCCTC GATCGAAAGG TGCTTATTTC GGTTGAGCCC GGTCAGCTGT TTGTCAAGAT CGTTCAGGAA GAGCTGACCG AATTGATGGG TGGCGAAGCG CAGAACATCA ACATCAAGGG CGATCCCGCC ATTATTTTGA TTGCTGGTTT GCAGGGTTCC GGTAAAACAA CCTTCTCTGG TAAACTCGCA TCGTACCTGA AAAAACAGGG ACGCAATGTA TTACTGGTAG CTGCCGATAT CTATCGTCCG GCGGCTATCG ATCAGCTGAA AGTACTGGGT GAGCAGGTTG GGGTGGAGGT GTACGCCGAG CCGGAAAACA AAAATGCTGT TCAGATTGCC CAGAATGCTA TTGCCCTGGC CCGCAAAACC GGCAAGAAAA TCGTAATCGT TGACACCGCC GGCCGTTTGG CTGTCGATGA AGCGATGATG CAGGAAATTG AAGCCCTTAA GCGCGCCATT GCCCCATCCG AAACACTGTT TGTTGTGGAT TCGATGACCG GACAGGATGC GGTCAATACG GCCAAGACAT TCAACGAGCG GTTAAATTTC GACGGTGTTG TATTAACAAA ACTGGACGGC GATGCCCGTG GTGGAGCGGC TTTGTCGATC AAGACGGTTG TTAACAAGCC GATCAAATTT ATCAGTACGG GGGAGAAGAT GGAAGCACTC GATGTGTTCT ATCCCGACCG TATGGCCAGC CGTATCCTGG GCATGGGCGA CGTGATCTCG CTGGTCGAGC GCGCTCAACA GGCTTTCGAC GAAGACGAAG CCAAGCGTAT TAACGCGAAA ATGCGCAAGA ATCAGTTCGA CTTCGACGAT TTCCTGTCGC AGTTGCAGCA GATCAAGAAA ATGGGTAATG TTAAAGACCT GCTCGGGATG ATTCCGGGGA TGGGTAAAAT GATTAAAGAT CTGGATATCG ATAACGATTC GTTCAAGCCA ATCGAAGCGA TTATCAGTTC TATGACACCC AAAGAGCGCA GCCGTCCCGA CATCATTGAC GGCAGCCGCA AAAAGCGCAT TGCCACCGGT AGCGGTACCA GCATCACGCA GGTTAACAAT CTATTGAAGC AGTTCGACGA AATGCGCAAG ATGATGAAGA AGATGAACAC CATGCAGTCG TCGGGCAAGC TGAATAAAAT GATGCGCTAA
|
Protein sequence | MFENLQDKLN KAIKTLKGQG RITEINVAAT IKEVRRALTD ADVNYKVAKD ITDRIRDKAL DRKVLISVEP GQLFVKIVQE ELTELMGGEA QNINIKGDPA IILIAGLQGS GKTTFSGKLA SYLKKQGRNV LLVAADIYRP AAIDQLKVLG EQVGVEVYAE PENKNAVQIA QNAIALARKT GKKIVIVDTA GRLAVDEAMM QEIEALKRAI APSETLFVVD SMTGQDAVNT AKTFNERLNF DGVVLTKLDG DARGGAALSI KTVVNKPIKF ISTGEKMEAL DVFYPDRMAS RILGMGDVIS LVERAQQAFD EDEAKRINAK MRKNQFDFDD FLSQLQQIKK MGNVKDLLGM IPGMGKMIKD LDIDNDSFKP IEAIISSMTP KERSRPDIID GSRKKRIATG SGTSITQVNN LLKQFDEMRK MMKKMNTMQS SGKLNKMMR
|
| |