Gene Slin_4700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4700 
Symbol 
ID8728464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand- 
Start bp5721579 
End bp5722127 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389477 
Protein GI284039547 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0829428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.178604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAATA ACCGAACATT CATTCCCGTA CAACCCGGTG GCGAAGAGCT ACAGGAAATA 
ATGGGCCAAG TACCATCAAC GCTGGTTCGC TGGGGTAATT CTGTACTGCT ACTGCTAGTA 
GTTTCGCTGT TGCTGGCAAC GTATTTTGTC TCCTTCCCGG AGCGAATTAC TGGCCGGTTC 
CAACTGGAAA AGGCGCCTGT CCGTCATCCG GTTCGGCAGC GGGGCTTAAC CGCTCGTCCG 
CTATACGGCG TCATCCGGGT TGGTCAGAAA CGAGCTGGTA AAATTGAACC GGGGCAAACC 
GTACTTTTAA AATTCGACAG CTACCCAGTG GATGAGTTTG GGGCCGTAGG CGGGAAAGTC 
ATCCGAATTG CCGATACAAG CGATTCGACG GGTCAATGGT TGATTGACGT TGTTCTGCCC 
AATGGCTTAT TAACAACGCG ACACCAACAG CTACCGCACC GGACGGACAT GCTGGCTCAG 
GCAGACATCG TGCTGGAAGA CGTTCGGCTG ATACACCGCA TTATTCCGGG CCTGGGCATT 
GCGCACTGA
 
Protein sequence
MENNRTFIPV QPGGEELQEI MGQVPSTLVR WGNSVLLLLV VSLLLATYFV SFPERITGRF 
QLEKAPVRHP VRQRGLTARP LYGVIRVGQK RAGKIEPGQT VLLKFDSYPV DEFGAVGGKV 
IRIADTSDST GQWLIDVVLP NGLLTTRHQQ LPHRTDMLAQ ADIVLEDVRL IHRIIPGLGI 
AH