| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4690 |
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| Symbol | |
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| ID | 8728454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5706537 |
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| End bp | 5708249 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003389467 |
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| Protein GI | 284039537 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.02417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGA ATATAAACGC GCAAAAAGCC CAAACCTACG ACGCCATCGT GGTGGGTTCC
GGTATGACGG GGGGCTGGGC CGCTAAAGAA CTCACCGAAA AAGGATTGAA CGTGCTGGTG
CTGGAACGCG GCTACGAAAT CAAGCACGTT GAGGATTACA AAACCGCCAT GCAGGACCCC
TGGGAGTTCG AGCACCGGGG CAAAATCACG ACGGTAGCCG CCGAAGAGCA CTATGCCAGT
ATGTTCTTCT CGGCCAAAGA GGGCAGCCAG CTCAATTTCA CCAACGACAA AGAGCACCCG
TACATCCAGA AACGGCCATT CAACTGGATT CGGGGCTACC ATACGGGCGG CAAATCGCTG
ATTTGGGGCA AACACACGTA CCGCTGGAAC CGGGAAGATT TCATGGCGAA TGCCAGGGAA
GGACTCGGCA TCGACTGGCC CATTCGCTAC GAAGACCTGG TGCCCTGGTA CACCTATGTC
GAAAAGTTCG TGGGTATCAG CGGGCAGGCC GAAGGGTTAT CCGTTTTGCC GGACAGCACC
TTTCTGCCGC CTATGGCGAT GACCGCTCCG GAGATGCACT TCAAAAAATC GGTCGCGCAG
AAGCTGAATC GTCCCATAAC GATGGGTCGG GTGGCACACC TTACCAAACC GCAACCCTGG
CATACGGCGG TGGGTCGGGC GAGTTGTCAG TTTCGGAACC GCTGTACGCG GGGCTGTCCG
TTCGGTGCTT ACTTTAGTTC GCTGGCAGCT ACCTTACCAG CCGCCCGAAG CACCAACCGG
CTGACGATCC TGCACAACGC CATTGTAAAA GAGATTATCC TAGACGATCA CGCCCAGAAG
GCCAAAGGCG TGCGGGTTAT TGACCAGAAC ACACTGGAAG TCCGGGATTT CTACGCCAAA
GTGATTTTCC TGAATGCGGG AACAATCGGC TCTACGTCGA TTCTGATGAA CTCAAAATCG
GCCCGTTTCC CGAACGGCCT GGGCAACGAC AGCGATCAGT TGGGGCGAAA CCTGATGGAC
CACCACCTGG CCGTTGGGGC CAGAGCCGAT ATTCCCGGCT TTGAAGACGA TCACTATTTC
GGAGCGCGTC CGGGCAGTTT GTACATCCCG CGCTTCCGCA ACTGGGGCAA CGACAAAAAA
CGCGACTACC TGCGTGGCTT CGGCTACCAG GGCGGAGCCT CCCGCGCCGA CTGGGCGAGG
GGTGGTACGG AGCCGGGTTT CGGTGCGGAC TTCAAGAAAC GCATGACGCA GCCCGGCCCC
TGGAAAATGA GCCTCACCGG TTTCGGCGAA GTGCTGCCCG ATCCGAACAA CCGCTTCTAC
CTCAGCCCCG ATAAGACCGA CAAATGGGGT CTGCCACAGG TGGTGTTCGA CGCCGATTTC
AGTGCCAACG ACCGGGCCAT GCGGAAAGAT ATTATGAACG ACGGCGCCGA AATGCTGGAA
GCTGCCGGTT TCAAGAACGT TACTACCTAC GACAACCCGG CGGCACATAT GGGGCTGGGT
ATCCACGAAA TGGGAACCGC CCGCATGGGC AAAGACCCGA AAACGTCGGT ACTGAACAAG
TACAATCAGG TACACACCTG CAAAAACGTA TTTGTGACGG ATGGATCAGC CATGGCGTCG
GCCTCGAACG TAAACCCCTC GCTGACCTAC ATGGCCCTCA CCGCCCGGGC TGCCAGCTAT
GCTGTAGCGC AACTGAAAGC GAAGAGTTTA TAA
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| Protein sequence | MNLNINAQKA QTYDAIVVGS GMTGGWAAKE LTEKGLNVLV LERGYEIKHV EDYKTAMQDP
WEFEHRGKIT TVAAEEHYAS MFFSAKEGSQ LNFTNDKEHP YIQKRPFNWI RGYHTGGKSL
IWGKHTYRWN REDFMANARE GLGIDWPIRY EDLVPWYTYV EKFVGISGQA EGLSVLPDST
FLPPMAMTAP EMHFKKSVAQ KLNRPITMGR VAHLTKPQPW HTAVGRASCQ FRNRCTRGCP
FGAYFSSLAA TLPAARSTNR LTILHNAIVK EIILDDHAQK AKGVRVIDQN TLEVRDFYAK
VIFLNAGTIG STSILMNSKS ARFPNGLGND SDQLGRNLMD HHLAVGARAD IPGFEDDHYF
GARPGSLYIP RFRNWGNDKK RDYLRGFGYQ GGASRADWAR GGTEPGFGAD FKKRMTQPGP
WKMSLTGFGE VLPDPNNRFY LSPDKTDKWG LPQVVFDADF SANDRAMRKD IMNDGAEMLE
AAGFKNVTTY DNPAAHMGLG IHEMGTARMG KDPKTSVLNK YNQVHTCKNV FVTDGSAMAS
ASNVNPSLTY MALTARAASY AVAQLKAKSL
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