Gene Slin_4689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4689 
Symbol 
ID8728453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5705929 
End bp5706507 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389466 
Protein GI284039536 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.591114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0263781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAC GGGAAGCACT ATCGCGGGTT AGCCTGATGC TGGGCGGAAC CCTCTCGGCC 
CCGACGCTGC TGGCCTTTGA CCGCTGGAGC CGGGTGCCCG GTGAAGGAGC AAAAATTGAT
GCGCTCATAC CAGCCAGCCA GCCCTTATCC CTGAATGAAG AACAGCGTGA AGTAATTGCC
CGCGTGGCTG AACTGATCAT ACCTAAAACG GATACGCCCG GTGCCATCGA CACGGGTGTT
CCGGCCTTTA TTGAACTGAT GCTGCGCGAT GGCTACACCA AACCTGTGCA GGATACGTTT
CTGGCGGGTC TCGGTGATCT GGCGGGCAAA GGACTCCTGA CCGCTTCGCC CGATCAGCAA
ACAAGACTCC TTAAACAGGT TGAAGCCGAT GCGCTGGCCA ACGCCAAAGC CGGTTCCGTA
TCGTTCTGGC AACTGATCAA AGAGCTGACC GTCTGGGGGT ATTTCACCTC GGAAGCGGGC
ATTAAGTCAT CGTTCGACTA CCAGCCGAAC CCGGGGAAAT TCGAGGCCAT CAAGATCAGG
CCGGGTCAGA AAGATTTCAT GTACGGCAAC CAGGTTTAA
 
Protein sequence
MNRREALSRV SLMLGGTLSA PTLLAFDRWS RVPGEGAKID ALIPASQPLS LNEEQREVIA 
RVAELIIPKT DTPGAIDTGV PAFIELMLRD GYTKPVQDTF LAGLGDLAGK GLLTASPDQQ
TRLLKQVEAD ALANAKAGSV SFWQLIKELT VWGYFTSEAG IKSSFDYQPN PGKFEAIKIR
PGQKDFMYGN QV