Gene Slin_4683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4683 
Symbol 
ID8728447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5702611 
End bp5703072 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content43% 
IMG OID 
Producttransposase IS200-family protein 
Protein accessionYP_003389460 
Protein GI284039530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.372329 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0818031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAATA CCTATACTCA AATACACCTT CAATTAGTCT TCGCGGTTAA ACACCGGACT 
GCCGTAATAA ACCCTGGCTG GAAATACGAT CTGTATAATT ACATAACCGG TATTATCCAG
AACCATAAAC ATAAGCTACT CGCCATCAAT GGCGTGCCTG ATCACATTCA CATTCTGATT
GGGATGCGCC CTACACAATC CCTTTCCGAT TTGATGCAGG ATATTAAACA AAGCTCATCA
AAATGGATTA ACGAACAACA GTTGACCGTC GGGCGTTTCG CCTGGCAGGA GGGATATGGT
GCGTTTTCGT ATGGAAAGAG CCTATTACCT GCCGTTATCA ACTACATCGA GAATCAGGAA
GAGCATCACC AAACGCGCAC ATTTTTAGAA GAGTACCGCC GGTTTTTAAA TGTTTTTGGC
ATTGAGTACG ACGAACAATA TCTATTCAAA CCGCTTGAAT AA
 
Protein sequence
MPNTYTQIHL QLVFAVKHRT AVINPGWKYD LYNYITGIIQ NHKHKLLAIN GVPDHIHILI 
GMRPTQSLSD LMQDIKQSSS KWINEQQLTV GRFAWQEGYG AFSYGKSLLP AVINYIENQE
EHHQTRTFLE EYRRFLNVFG IEYDEQYLFK PLE