Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4683 |
Symbol | |
ID | 8728447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5702611 |
End bp | 5703072 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | transposase IS200-family protein |
Protein accession | YP_003389460 |
Protein GI | 284039530 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.372329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0818031 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAATA CCTATACTCA AATACACCTT CAATTAGTCT TCGCGGTTAA ACACCGGACT GCCGTAATAA ACCCTGGCTG GAAATACGAT CTGTATAATT ACATAACCGG TATTATCCAG AACCATAAAC ATAAGCTACT CGCCATCAAT GGCGTGCCTG ATCACATTCA CATTCTGATT GGGATGCGCC CTACACAATC CCTTTCCGAT TTGATGCAGG ATATTAAACA AAGCTCATCA AAATGGATTA ACGAACAACA GTTGACCGTC GGGCGTTTCG CCTGGCAGGA GGGATATGGT GCGTTTTCGT ATGGAAAGAG CCTATTACCT GCCGTTATCA ACTACATCGA GAATCAGGAA GAGCATCACC AAACGCGCAC ATTTTTAGAA GAGTACCGCC GGTTTTTAAA TGTTTTTGGC ATTGAGTACG ACGAACAATA TCTATTCAAA CCGCTTGAAT AA
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Protein sequence | MPNTYTQIHL QLVFAVKHRT AVINPGWKYD LYNYITGIIQ NHKHKLLAIN GVPDHIHILI GMRPTQSLSD LMQDIKQSSS KWINEQQLTV GRFAWQEGYG AFSYGKSLLP AVINYIENQE EHHQTRTFLE EYRRFLNVFG IEYDEQYLFK PLE
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