| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4637 |
|---|
| Symbol | |
|---|
| ID | 8728401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 5643596 |
|---|
| End bp | 5645071 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_003389414 |
|---|
| Protein GI | 284039484 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCA GCCTCTTTTT TACTACCTAT TTGCTACTAC TGAGCGGTTT ACTGGCTAAC
GGACAACCGA AGCCCCCAGC CAGCAACACC CAGGCGGAAG CTACTATCCA GCAACTGGGA
ACGGCCTTCG TCCATGAAAA GTCGCACGTG GGATTATCTG TCGGTATTGT TCGGAACGGA
AAGACATCGT TCTATAATTT CGGTACGACG GAGAAAGGCA AAAATGAGTT GCCCACGCAA
CATACCATTT ATGAAATCGG GTCGATCAGC AAGACGTTTG GGGGTCTGCT ACTGGCGCGG
GCCGTTATCG ACAAGCGCGT CCGGCTCGAA GACGACATCC GCCAATACCT CGACGGCGAC
TACCCGAACC TCGCTTTCAA GGGCCAACCT ATTCGGCTGG TCAACCTGAC CAACTGGACG
TCGGAGTTAC CGGATAACTT CCCGGATAAG CCCGACGCCT ATAAGCAGGC GAACCCCGAT
TCCATTGCGT TCCTGATTGT GAACGAATTA CAGAACTACA CACGGCAGGA CTTTTTCAAT
GACCTGCACA ACGTTACGCT CAAGGCAGCA CCCGGCCAGA ATCCCCGCCA CTCCAACGTA
GCGGCCCAAT TGCTGGGGTA TATTCTGGAA AAAATCTACC AGAAACCCTT TGCCGAATTG
ATCGCCACGC AGATCGAACA ACCACTCGGT ATGCGGAACA CCTTTGGTTC GCCACAACCA
GCGGATCGGT TCGCGATAGG CTACAGTGGA AATGGCGTCC AAATGCCCGC GTTTACGCTG
AAAGCCATGC AGGCCGCCGG TGGCCTTCGC TACAGTGCAG CCGATTTGCT GAAGTATGCC
GCTTATCAGT TGGAAGAGCG AGACCCGGCC GTAAAAATAA GCCATCAACC TACCTGGGGC
AGCCCCGATA GCCAGGCATT TGGCCTAAAC TGGTTTCTGC ATAAAACCAT CGACAGCAAG
CGACGGATCG AACACTCGGG CGGTACGTTC GGCTTTGCCA GTTACTGCGA CCTGTATCCC
GATCAAAAAA CGGCCCTTGT CCTGTTCGCC AACAACTCCG ATCAATCAAC CCAGGGACAA
CTCGGCGAAC TATCCAGTAA AATCATGGAT GCGTTGTTTG GTAAGCCAGC TGCCCTGACG
GCCCTCAACG CCGAGCTAGA AAAACAGGGT TTTGCACAGG CTCTTGCCGT TGTGAAAGCC
GTCAGGAAAA AACACCCGGA GTTATTTCTG AGCGAAGAGT ACGTAAACAT CTGGGGCTAT
ACGCTGGCCG GTCAGGGAAA ACTAAACGAA GCACTGGAGA TTTTCAAGCT GAACGTCAGT
CTGTATCCGA AAGGCTACAA CACCTACGAC AGCCTGGCCG AAACCTATGA CCGCCTTGGA
AACAGGGGGT TAGCCATCAA AAATTACAAG CAATCGCTGG CGCTGAACCC AGGAAATACG
AACGCGATCG AGTATTTAAA AAAGGCTGGA CAGTAG
|
|---|
| Protein sequence | MKTSLFFTTY LLLLSGLLAN GQPKPPASNT QAEATIQQLG TAFVHEKSHV GLSVGIVRNG
KTSFYNFGTT EKGKNELPTQ HTIYEIGSIS KTFGGLLLAR AVIDKRVRLE DDIRQYLDGD
YPNLAFKGQP IRLVNLTNWT SELPDNFPDK PDAYKQANPD SIAFLIVNEL QNYTRQDFFN
DLHNVTLKAA PGQNPRHSNV AAQLLGYILE KIYQKPFAEL IATQIEQPLG MRNTFGSPQP
ADRFAIGYSG NGVQMPAFTL KAMQAAGGLR YSAADLLKYA AYQLEERDPA VKISHQPTWG
SPDSQAFGLN WFLHKTIDSK RRIEHSGGTF GFASYCDLYP DQKTALVLFA NNSDQSTQGQ
LGELSSKIMD ALFGKPAALT ALNAELEKQG FAQALAVVKA VRKKHPELFL SEEYVNIWGY
TLAGQGKLNE ALEIFKLNVS LYPKGYNTYD SLAETYDRLG NRGLAIKNYK QSLALNPGNT
NAIEYLKKAG Q
|
|---|
| |