Gene Slin_4636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4636 
Symbol 
ID8728400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5642058 
End bp5643548 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content53% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003389413 
Protein GI284039483 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATGA ATCCATCTAG GCTGACTACC TGCTTGTTAG GATTAGTAAT CACGTTTACG 
TTCAGCTTCG GACAAAATCG TCCCGCTCGG GCTACTTCCT CTATGTCCAC GCAAAAATCG
GCGAACGCGC TCGACAAGTT TTTGCGTGAT CAGATGGGCC AGCTTAGAAT TCCGGGCATG
CAGGTGGCCG TTGTACAGCG TGGGCATCTG GTGTTCAGCA AATCGTACGG CTTTGCCAAT
CTACAGGACT CAATTCCAGT AACAAGCAAA AGCGTTTTCG CTATCAACTC CTGCACGAAA
GCGTTTACGG GCGTGGCCAT TATGCAGCTG GTTGAAGAAG GTAAAGTGGA CCTCGGCGCT
CCCGTTTCCC GCTACCTCGA CGGACTTCCG GCAACCTGGC AACCCATAAC GATTCGACAG
TTGTTGACCC ACGTTTCGGG CCTGCCGGAT ATTCTTCGGG TTCTCGGTAC ACCTGGACAG
GAGATCAGCG AGGAAACCGC CTGGGCTCGG ACAAAGGCCA TGCCGATGGA TTTTCCAAGG
GGTGAGCAGT TTAGCTATAA CCAGACAAAC TACGCGCTAC TGGGCAAAAT CATCGACAAG
CTCAGGGATA AACCGTTCGT TCAGGTATTC AACGAACGAC AGTTCATGAT AGCCGGTCTG
GCCAATACCG GCTTTGGTGA CTCCCGCGAT GTAATACCGC ATAAAGGCCC ATCCTATCGG
TATATCTCCC GTCTGGATGG GAATGTGCTG CATATCCCTA AGCTTACCCC CTCCTACGAG
GAATTCCCCG CCTTCCGTCG GACAGCTTCG GGTATGAACA GCACCGCCGA GGATATGGCT
CACTGGATTA TCGCCTTGCA GCAGGGTAAA CTGTTAAAAA CGAAAGCGGC CCGTGATACG
ATGTGGACAG CGGGTCGATA CAACAACGGT TCGCCTACGC AGTGGGCGCT GGGCTGGGGC
CTGACCAAAT TCCGACCCAA ACACTGGGCC GTGGGTATGT CGGGGGGTGG TCGTTCGGCT
TTTCTGGTCT ATCCCGACGA TGATCTGGCG GTTATTGTAT TGACGAATCT GGCGGGTTCT
TCACCGGAAA ATTTCATTGA GGAAATCGCC GGGTATTATA ATCCAGACAT TCCGGCATCC
GACCCGATTA CGAGCCTTCG GCTACAGCTA CAGAAACGCG GTTTCGAGCA GGCTATCCCG
GTAGCGAACG AATTGAAAAA GCGAAACCTA CAGCCGAACG AAGATGAATT GAACGACTGG
GCCTACCGCC TGATGAGCAG CGGCCAGACG AAAGAGGCCC TTGAGCTTTT CAAACTGAAC
GTCGACCTCT ACCCCCAAAG CTGGAACGTC TACGACAGTC TGGCCGAAAG CTACGAGCGG
CTGGGTAATT CGGAGCTGGC GGTCAAACAT TATAATCGCT CGCTGGCCTT GAACCCCGAC
AACAAAAACG CGACCGAACG CTTAAAACGG CTAGCCCAAA CCAATAAGTA A
 
Protein sequence
MAMNPSRLTT CLLGLVITFT FSFGQNRPAR ATSSMSTQKS ANALDKFLRD QMGQLRIPGM 
QVAVVQRGHL VFSKSYGFAN LQDSIPVTSK SVFAINSCTK AFTGVAIMQL VEEGKVDLGA
PVSRYLDGLP ATWQPITIRQ LLTHVSGLPD ILRVLGTPGQ EISEETAWAR TKAMPMDFPR
GEQFSYNQTN YALLGKIIDK LRDKPFVQVF NERQFMIAGL ANTGFGDSRD VIPHKGPSYR
YISRLDGNVL HIPKLTPSYE EFPAFRRTAS GMNSTAEDMA HWIIALQQGK LLKTKAARDT
MWTAGRYNNG SPTQWALGWG LTKFRPKHWA VGMSGGGRSA FLVYPDDDLA VIVLTNLAGS
SPENFIEEIA GYYNPDIPAS DPITSLRLQL QKRGFEQAIP VANELKKRNL QPNEDELNDW
AYRLMSSGQT KEALELFKLN VDLYPQSWNV YDSLAESYER LGNSELAVKH YNRSLALNPD
NKNATERLKR LAQTNK