Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4635 |
Symbol | |
ID | 8728399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5641213 |
End bp | 5642052 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003389412 |
Protein GI | 284039482 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.91802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCAC ACACATTCAC CAACGCACTC CTGTTCCTTA GTCTGTTTAT CATTCGTCCA TCAATCGCTC AGAATGATGT AAAAGAGCAA TTGGTTGTTC CTTTGAGTGA TCCAGGCAAA CCCGGTTTGC TCAAAGTTAG CCTGATCAAT GGCTCCATTC ATGTCATTGG CTATAGCGGC AAAGACGTCG TGATCGACAT TACCAGCAGC CCAAAACGCG GACGACGCGA CGACGATGAT CGCCCGGATC AGTCCTCAAA CGGCATGAAA CGCATTACTA CGGGAGTTCC GCTCGATGTT AGTGCCGAAG AGAAAAACAA TACGGTGAAC GTTCACGCCA ACACCATGAA GCAAACCGTC GATCTGACAA TTAAAGTACC GCAGCGTTTT TCGCTCAAGG TCAGCACGAT AAATAACGGC ACAATCGAGG TAGAGAACGT AAGCGGAACG CTGGAAGCGA CGAACGTAAA CGGGTACATT CACCTGACAA ATATTGCGGG ATCGGCGGTA GCCAATACGG TAAACGGCAA CCTGATCGCT ACCTTCAAAT CCATCGACTC CGGCACGCCC ATGGCCTTTT CTACACTGAA CGGCAACGTC GACGTAACCT TCCCGGCCAG CGTGAAAGCA AACAGCAAAC TCAAATCCGA CCGGGGTGAT ATCTACAGCG ACTTCGATAT CGACGTCGAT AAAAACCAGC CCAAGGTAAG CCGTACCAAT CAGTCAGGGA TGTATCAGGT AAAAATAGAG GATTGGGTGT ACGGCAAGAT CAACGGGGGT GGCCCGGAAG TCATGATGAA GAACATGAAC GGAAATATCT ATATCCGCAA GGCGAAGTAA
|
Protein sequence | MNAHTFTNAL LFLSLFIIRP SIAQNDVKEQ LVVPLSDPGK PGLLKVSLIN GSIHVIGYSG KDVVIDITSS PKRGRRDDDD RPDQSSNGMK RITTGVPLDV SAEEKNNTVN VHANTMKQTV DLTIKVPQRF SLKVSTINNG TIEVENVSGT LEATNVNGYI HLTNIAGSAV ANTVNGNLIA TFKSIDSGTP MAFSTLNGNV DVTFPASVKA NSKLKSDRGD IYSDFDIDVD KNQPKVSRTN QSGMYQVKIE DWVYGKINGG GPEVMMKNMN GNIYIRKAK
|
| |