| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4581 |
|---|
| Symbol | |
|---|
| ID | 8728345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 5552157 |
|---|
| End bp | 5553641 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003389359 |
|---|
| Protein GI | 284039429 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.617643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGTGAGG CAACGGTTGC CAACCAGCTC GTAGCAAGCT TTGCCTATCA GGTGTATCTT
TACGTTACGC TACTACTTGC GACCCTGCTT CTAACCTTCC TGACTAAGCA CATGAAAAAA
CGGCTATTAG TTACGATAAG CCTGTTGCTT ATGGCTTTAA CCACCGCTGT AAACGTGGTT
GTGGCCCAAT CGACTTCACC AGCGTTGCTC TCGGTAGGGG CGGCCAAGGT AGACATAACC
CCTGCCCTGA ACGAACTCAA AAAACCGTAT TTCGGTATCA ACGACAACAT ATACTCCCGG
GCGGTTGTCG TCAACAATGG CACGACAACC GTAGCGCTCG TTTCGGTCGA TATTGGGGGC
ATCAATGACG AAATGGCGGA TCGTATTCTC GCTAAGATTA CGGCTACATC GGGCATTCCT
ACCCGAAACA TACTGATCAC CGCTACGCAT ACGCACAGCG TGCCGTTTGG GATCAGTGGT
GACGCCTTTG AGTCTAAAAT TGCGAGTGCC GTCAAACTGG CGAAAGACAA GCTACAGCCC
GCCCGTGTCG GCTACGGCGA AGGTGTGTCG TATATCAATG TGAACCGCAA TATCATTGAC
CCCGACACCC GCCGGTGGTG GGAAGGTCCG AATTATGATG GTCCCTCCGA CAAAACCGTA
GCCGTGGTCA CCTTTGAATC GCTGGGCGGT AAACCCATTG CCATCTATTA CAACTATGCC
ATGCACGGCG TTATTTCCGG CATGTTCGAT CAGGTGAGCG GAGATGTTCC GGGGGCTACC
TCGCGTTATC TGGAAAACAA CTTCGACGAT GAGACCATAG CCCTCTGGTC GACCGGGGCC
TGTGGTGACC AGAACCCGAT CTATTACCAG CAGACCTATG ATTTACGCGA GATCCGCGTT
AAGGAGTACG CCAAACGGGG CATCGATATC AGCAATAAAA TGCCCCCCGG TGGCGAAGGG
CTGGATCGGA AAGACCCGAA GGTGATCAAA CTGATGGAAC AGCAAAAGCA AATGCTGCTG
TCGATGGGGC AACTGCTGGG CGAAGAGGTG CTACACACCA TGCGGGGCAT TAAACGGAAA
GTAAGCAACC CGATTGTGCA GACCGATCAG CGTATCATCA ACTGTCCCGG ACGCAAGCGG
CTGGACGAAG GCCGGGCGGG CTACGCGGGT ACGTATGCCG ATGCGGATTC GATTCCTCTC
CGGCTAGGGT TAATCCGTTT GGGCGACATT GCGCTTACGG CCGTCAACGG CGAGGTGTTC
AACCCCATTT CGACCCGCCT TAAAAAAGAA TCGCCCTTTG CCAACACCCT GATGACCACC
TTAACTAACG GCTATGCCCG TTCGGGCTAT ATTCCCCACG ATGCCGCTTT TGGCACCTAC
ACCTTCGAGG TCGTTTCGTC GCGGCTCAAG CCGGGTTTTG CCGAAAATGC AATTGTCAAC
GGTCTACTCG ACATGATGTA TGCCAGCCTG CAAGTAAAGC CGTAA
|
|---|
| Protein sequence | MGEATVANQL VASFAYQVYL YVTLLLATLL LTFLTKHMKK RLLVTISLLL MALTTAVNVV
VAQSTSPALL SVGAAKVDIT PALNELKKPY FGINDNIYSR AVVVNNGTTT VALVSVDIGG
INDEMADRIL AKITATSGIP TRNILITATH THSVPFGISG DAFESKIASA VKLAKDKLQP
ARVGYGEGVS YINVNRNIID PDTRRWWEGP NYDGPSDKTV AVVTFESLGG KPIAIYYNYA
MHGVISGMFD QVSGDVPGAT SRYLENNFDD ETIALWSTGA CGDQNPIYYQ QTYDLREIRV
KEYAKRGIDI SNKMPPGGEG LDRKDPKVIK LMEQQKQMLL SMGQLLGEEV LHTMRGIKRK
VSNPIVQTDQ RIINCPGRKR LDEGRAGYAG TYADADSIPL RLGLIRLGDI ALTAVNGEVF
NPISTRLKKE SPFANTLMTT LTNGYARSGY IPHDAAFGTY TFEVVSSRLK PGFAENAIVN
GLLDMMYASL QVKP
|
|---|
| |