| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4561 |
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| Symbol | |
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| ID | 8728325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5531002 |
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| End bp | 5533476 |
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| Gene Length | 2475 bp |
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| Protein Length | 824 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003389339 |
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| Protein GI | 284039409 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0251417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAT TTTTCCTACT GATTAGCCTG ACGCTAACCG GCGAACTGGC CTATACACAA
CCCGCGCCAA GCCGAATTAT TCGTGGTTCG GTAACCGACG CTGACAGCCG CAAACCTATT
CCCTTCGGCA CCGTCAACCT CGTCGGTCAG AACAAAGGGG CTATTACTGA TGCTCGTGGG
CAATATTCGC TGTCCATCAA AGCCGATTCG GTGCTGCGCG ACCTGATTAT TTCCTGCGTC
GGCTTCAAAT CCGATACGGT ACGGATCAGC CCCGGCACTA ACGTATATGA CGTAACGCTA
CTGCCCATCG TTAACGCTTT AAATGAAGTG GTAGTGACGG GCGTAACGCG GGGAACCCTC
ATGAAGCAAA ACCCGGTCGC TATTCTGGCC ATTTCGCGTA AGTCGATTGA GAGTACAACC
AGTAGCAACA TCATCGACGT ACTGGTGAAA AATGCACCGG GACTGACAGC GGTTAAAACT
GGGCCTAATA TTTCTAAACC ATTTATCAGG GGGCTGGGCT ATAACCGGGT GCTGACGCTT
TACGACGGGG TTCGGCAGGA GGGCCAGCAG TGGGGCGATG AGCATGGCGT GGAAGTTGAC
AATTACAATA TCGACCGGGC CGAGGTTATC AAAGGCCCGG CCAGCCTGAT GTACGGCTCC
GACGCCCTGG CAGGTGTTGT GAGTATGATG CCGATCTATC CAAAAGACAC CGATGGCAAG
CTGAAAGTAG GTTTCGTGAC CGAATACCAG TCGAACAACC GGCTCCTGGG CGAGTCAATC
AGTCTGGCCT CCGGCGGGTC GCGCTGGGCC TGGAATATGC GCGGGTCCAT ACGGGCGGCC
ACTAACTACC AGAATAAAGT TGACGGCCGG GTATACAACA CTGGCTTTTC GGAACGAACG
CTCACCACTA TGCTGGGCTA TTCGGGCCAC CGGGGTTATT CGCGTTTCGG GGCTTCGCTC
TACGACAATT TGCAGGGTAT TCCCGACGGA AGCCGCGACT CGCTTACCCG CCAGTTTACC
CGTCAGGTGT TCGAATCGGA CCTGGACGAT ATCAAGAACC GACCCATCGT ACCCGCCAGC
GAGTTATCGT CATACCGACT TAGCCCGTTA ATTCAGCACA TTCAGCATTA CCGGCTACAC
ACGAACAACC ATTATCAGAT TGGTAATGGC GAACTGGACG TGTTGCTGGC GTTTCAGCAG
AATGTTCGGC GGGAGTTCAA TCACCCCACT CAACCCAACC AGCCGGGTTT GTACGTCCGG
CTGAACACCC TGAACTATGG CGTACGGTAT AACCTGCCGA ACGTGGGTCG ACTGGCTACA
ACCGTGGGCG TGAACGGCAT GGCCCAGTCC AACAAGAATA AGAACGGTAC GGCCTTCCCC
ATTCCGGACT ACAAACTGTT CGATGTCGGC ACGTTCGTTT TTCTGAAATA CCAGGCCGAT
AAACTCACCC TGAGCGGTGG CCTTCGCTAC GACAACCGGC ACCTGACCGG CGATGATTTT
TACGTAGGTG TCGACCCAAA AACCGGCTTT GACAAACGCG CTTTTTTACC GGATACTGCC
GGAGCCACAC TTCAGTTTCC CCGCCTGAAG CAAACATTTA CGGGTATTTC CATGAGTATG
GGCGTAACCT ATGAGTTCTC GGAGAGACTG GCCCTGAAAG CAAATATTGC CCGTGGATAC
CGTGCGCCGA GCATTACGGA AATTGCCTCC AACGGTCTCG ATCCCGGTGC GCGTATCGTG
TACATCGGCA ACCGAGACTT TAAGTCGGAG TTCAGTTTAC AGCAGGACAT TGGCCTCACC
GCCACCTTCC CAGACATCAA TTTCGGTGTC AGCGTATTCA ACAACTTCAT CCAGAATTAC
ATATCCCTGA CACAGCTGGT CGATGCACAG GGTGAGCCGG TGGTGATTGT TCCGGGCAAC
AAAACGTACC AGTACCAGCA GTCATCGGCT CAGTTGTACG GTCTTGAAAC GCAGCTCAGT
TTGCACCCCA CTACCTGGCG GGGATTCAGT TTCGACAACA GTCTGGCGGT GGTGTACGGC
TACAACCGGG GCAGCCGGTT TACGGATGCG GGCGTCAACG GCGAGTACCT GCCGTTTATT
CCACCCCTGC GCGTAACCAC CGGCATCAGT CAGGCCCTCC CGCTTAAACG CAGTTGGTTG
TCCGAATTGA CGCTAAAAGC AGATGTTGAA CACAACGCCC GGCAGGACCG CTTTCTGGGC
CTGAACGACA CGGAAACGGC CACGGCGGGT TTCACCCTCG TCAATGCCGG TGCTGATGCG
CAGCTACATG TCGGCAAGGA CAAACCCGCG TTGCACGTCA TATTTCAAGT CAATAACCTG
TTCGATGTGG CGTACCAGTC GAACCTTAGC CGGTTAAAGT ATTTCGAGTA TTTCACCCAA
TCGCCCAACG GACATCTGGG CATGTACGGC ATGGGTCGGA ATATTTGCTT AAAACTGGTA
GTGCCGTTCA ATTAA
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| Protein sequence | MKSFFLLISL TLTGELAYTQ PAPSRIIRGS VTDADSRKPI PFGTVNLVGQ NKGAITDARG
QYSLSIKADS VLRDLIISCV GFKSDTVRIS PGTNVYDVTL LPIVNALNEV VVTGVTRGTL
MKQNPVAILA ISRKSIESTT SSNIIDVLVK NAPGLTAVKT GPNISKPFIR GLGYNRVLTL
YDGVRQEGQQ WGDEHGVEVD NYNIDRAEVI KGPASLMYGS DALAGVVSMM PIYPKDTDGK
LKVGFVTEYQ SNNRLLGESI SLASGGSRWA WNMRGSIRAA TNYQNKVDGR VYNTGFSERT
LTTMLGYSGH RGYSRFGASL YDNLQGIPDG SRDSLTRQFT RQVFESDLDD IKNRPIVPAS
ELSSYRLSPL IQHIQHYRLH TNNHYQIGNG ELDVLLAFQQ NVRREFNHPT QPNQPGLYVR
LNTLNYGVRY NLPNVGRLAT TVGVNGMAQS NKNKNGTAFP IPDYKLFDVG TFVFLKYQAD
KLTLSGGLRY DNRHLTGDDF YVGVDPKTGF DKRAFLPDTA GATLQFPRLK QTFTGISMSM
GVTYEFSERL ALKANIARGY RAPSITEIAS NGLDPGARIV YIGNRDFKSE FSLQQDIGLT
ATFPDINFGV SVFNNFIQNY ISLTQLVDAQ GEPVVIVPGN KTYQYQQSSA QLYGLETQLS
LHPTTWRGFS FDNSLAVVYG YNRGSRFTDA GVNGEYLPFI PPLRVTTGIS QALPLKRSWL
SELTLKADVE HNARQDRFLG LNDTETATAG FTLVNAGADA QLHVGKDKPA LHVIFQVNNL
FDVAYQSNLS RLKYFEYFTQ SPNGHLGMYG MGRNICLKLV VPFN
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