Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4549 |
Symbol | |
ID | 8728313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5514085 |
End bp | 5514630 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003389328 |
Protein GI | 284039398 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.86188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAGA AATATAAAGT CAGGGACCAA TCTAAAGTTT ATTTCGTAAC ATTCACGGTT GTACAATGGG TAGATGTATT TACCCGCCGT CACTATAAAG ACCTGGTTCT CGACAGTATA CGCTACTGTA TTGCTGAAAA GGGCCTTGAG CTTTATGCCT ATTGCCTGAT GACGAATCAC CTGCACATGA TTGTCGGGAC AAACAAAGAT CCCCTCCAAT ACATCATGCG GGATATGAAG CGACATACAT CGAGGTATCT GTTTCCTATG ATTGAAGAAG ATAGTGAAGA AAGTAGGCGG GGCTGGATGT GCTGGATTTT CAAGCGGGCG GGCCTGTCGA ATCCTGCTAA TAATGTGCAT CAGCTTTGGC AACAGGGCTT TCATCCCGTT GAGTTATTTA CGGCAACTGT ACTTCAGCAG AAGCTCGACT ATATTCATTA CAATCCTGTG GAAGCCGGGT TTGTGGACGA GCCGGAAGAT TATCTGTACA GTAGCGCCCG TAATTACGCT GGTCGAAAAG GGTTGATTGA TGTGATTTTG TTGTAA
|
Protein sequence | MSEKYKVRDQ SKVYFVTFTV VQWVDVFTRR HYKDLVLDSI RYCIAEKGLE LYAYCLMTNH LHMIVGTNKD PLQYIMRDMK RHTSRYLFPM IEEDSEESRR GWMCWIFKRA GLSNPANNVH QLWQQGFHPV ELFTATVLQQ KLDYIHYNPV EAGFVDEPED YLYSSARNYA GRKGLIDVIL L
|
| |