Gene Slin_4549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4549 
Symbol 
ID8728313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5514085 
End bp5514630 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content45% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389328 
Protein GI284039398 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.86188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA AATATAAAGT CAGGGACCAA TCTAAAGTTT ATTTCGTAAC ATTCACGGTT 
GTACAATGGG TAGATGTATT TACCCGCCGT CACTATAAAG ACCTGGTTCT CGACAGTATA
CGCTACTGTA TTGCTGAAAA GGGCCTTGAG CTTTATGCCT ATTGCCTGAT GACGAATCAC
CTGCACATGA TTGTCGGGAC AAACAAAGAT CCCCTCCAAT ACATCATGCG GGATATGAAG
CGACATACAT CGAGGTATCT GTTTCCTATG ATTGAAGAAG ATAGTGAAGA AAGTAGGCGG
GGCTGGATGT GCTGGATTTT CAAGCGGGCG GGCCTGTCGA ATCCTGCTAA TAATGTGCAT
CAGCTTTGGC AACAGGGCTT TCATCCCGTT GAGTTATTTA CGGCAACTGT ACTTCAGCAG
AAGCTCGACT ATATTCATTA CAATCCTGTG GAAGCCGGGT TTGTGGACGA GCCGGAAGAT
TATCTGTACA GTAGCGCCCG TAATTACGCT GGTCGAAAAG GGTTGATTGA TGTGATTTTG
TTGTAA
 
Protein sequence
MSEKYKVRDQ SKVYFVTFTV VQWVDVFTRR HYKDLVLDSI RYCIAEKGLE LYAYCLMTNH 
LHMIVGTNKD PLQYIMRDMK RHTSRYLFPM IEEDSEESRR GWMCWIFKRA GLSNPANNVH
QLWQQGFHPV ELFTATVLQQ KLDYIHYNPV EAGFVDEPED YLYSSARNYA GRKGLIDVIL
L