| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4543 |
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| Symbol | |
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| ID | 8728307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5507625 |
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| End bp | 5508917 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003389322 |
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| Protein GI | 284039392 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.781416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.876595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCGC TAGTTGCTAT AGTATTCTTT ACACTCATTT TTTCGCTCGA TGGGAAGGCG
CAACCCCTTA CGCTGGATCA GGCCCTTAAG CAGGCGCAGG CCAACCGGCT GGAGCTGCTG
AACGGTCAGT TACAGACGCA GATTGCGGAG AGTGACGAGG CCCGCCGACG CGCCCGCTGG
CAACCGCAAC TGAAAGCCGC AGCCGATTTT CGGTGGAACA CGCAAATTCA GCAAAGCGTC
ATAAAAAACG CGCCTTTTGC TAATGGGCAG GATGTAGTAC TCCGGTTTGG GACGCCAATC
GCCAACGTAT TGAATGTGCA GGCCGAACAG AAAATCTACG ACGCCCAATC GCCCATCGAC
CGCCGTATCA ATCAGGTCAA TGTAACGGCT CAGCAGACGA CGCTGGAGAA AACCGCCGTC
GACATACGAC AGCAAGTGAC CGAAGCCTAC TATCAGGCCG TATTCAACCG CGAGAAAATC
CGGCTGTCGG AGCGGGCCAG AACGCGGGCG CAGGGCTATC TGGAACAGGC GCAAACCCGC
TTTCGGGCTG GAACACTCCT CCAAACGGAT TTCGACCGGT TCGCGCTTGA TCTGAGCAAT
GCCGAGCTTA CCTACCGCAA CGACCAGCGC GACTATTCGC TGAGTCTGGA TAACCTCCGC
TATCGGATCA ACACGACCCA GGCCGTTGAA CCGGCCGATT CGCTGGAAGC TTTGTTTACC
CAGTTTCAGG AGGAAGCAAC CGGGAGCCGG CTGGAACTGA AACAGGAAGA GCTGAGCCGT
CAGCTCAATG AGTTGAATCA GCAACGGGAG CAGGCCCGGC TCGCACCCGT CGTGTCGGCA
TACGGGGCTT ATTTTGCGCA GCAACTGGCC GATGTGTTCA ATCCCTTTCA AGCCGATACC
TGGTATCGTT ACAATTATGT GGGTGTTCAG GTCAGCGTCC CGATTTTCGA CGGGCGACAG
GCGCGGATTA ATCGGCAGGA CTACGTACGT CGTGCTCAAG TGAACCAGAA CACCATCCAG
CAACTCAAAA ACGACTTCGA GTACGAAACG CGTTCGGCTA AAAATACGTT GGATCAGGCC
CGCGAAAACC TCGCCCAAAC CCGGAAAAAC ATCGTACAGG CGCAACGCAT ACTGGCTGTC
GACCGGGTTC GGTTTGATGC TGGTACGCTG TTGCTGGCTG ACTTCCGAAA CAGTAAATAC
AGCCTGCAAC AGGCCGAGAC GAACTACCTG CGCTCGGTAT ACGATGCCCT GTTAGGTCAG
TTGCAGTTGC GGAAGGCCAG AGGCAGTTTG TAG
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| Protein sequence | MKSLVAIVFF TLIFSLDGKA QPLTLDQALK QAQANRLELL NGQLQTQIAE SDEARRRARW
QPQLKAAADF RWNTQIQQSV IKNAPFANGQ DVVLRFGTPI ANVLNVQAEQ KIYDAQSPID
RRINQVNVTA QQTTLEKTAV DIRQQVTEAY YQAVFNREKI RLSERARTRA QGYLEQAQTR
FRAGTLLQTD FDRFALDLSN AELTYRNDQR DYSLSLDNLR YRINTTQAVE PADSLEALFT
QFQEEATGSR LELKQEELSR QLNELNQQRE QARLAPVVSA YGAYFAQQLA DVFNPFQADT
WYRYNYVGVQ VSVPIFDGRQ ARINRQDYVR RAQVNQNTIQ QLKNDFEYET RSAKNTLDQA
RENLAQTRKN IVQAQRILAV DRVRFDAGTL LLADFRNSKY SLQQAETNYL RSVYDALLGQ
LQLRKARGSL
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