Gene Slin_4541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4541 
Symbol 
ID8728305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5506489 
End bp5506935 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content44% 
IMG OID 
Producttransposase IS200-like protein 
Protein accessionYP_003389320 
Protein GI284039390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTACC GACAGATTTT ATACCACATC GTATTCGGCA CTAAATACAG AAACCCAACC 
ATCACCCATG CACACTGTGA GGAGCTGTAC AAATACATTT GGGGCGTCAT AAAGAACCAG
AAAGGCACCC TGTTCAGAAT AAACGGTGTA GAAGACCACA TCCACATTCT CAGTGACCTG
CATCCTTCCG TAGCGTTAGC TAATTTTGTC AAAGACATCA AAGTAGCCAG TTCGCTATGG
ATGAAAGCTA GTGGGCTATT CCCTGATTTT GAGGGATGGG CCGAAGGATA TGGCGCGTTT
ACATACTCGA TCAAAGAGCG TGACCGTGTT ATTAACTACA TCAAAAAGCA GAAAGAACAC
CACAAAAAAA TAACGTTCAA CGATGAATAC AAGAGCCTGC TGGACGAACA CGGCATAGCG
TACGACGAAA ACCACCTATT TCCCTAA
 
Protein sequence
MSYRQILYHI VFGTKYRNPT ITHAHCEELY KYIWGVIKNQ KGTLFRINGV EDHIHILSDL 
HPSVALANFV KDIKVASSLW MKASGLFPDF EGWAEGYGAF TYSIKERDRV INYIKKQKEH
HKKITFNDEY KSLLDEHGIA YDENHLFP