| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4505 |
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| Symbol | |
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| ID | 8728269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5460393 |
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| End bp | 5463533 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003389284 |
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| Protein GI | 284039354 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGGGC TAATCCTGCT GCTTTGCACG AATGTGTTTG CGCAAAGCAC TCGCTATACA
TTGAAAGGAC GGGTTACCGA TCCTGAAAAA ATGGGGCTTC CCGGAACCAC CGTTGTGCTT
GTTGGTACCA CCGTTGGTAC GACCACCGAT GCTGAAGGGA ACTACACACT CCCCGTTACG
CTGAAACCTG GTCCCGTTAC CGTTGCCTTT ACGTCGATCG GTTATGAAAC CCTACGCCAG
GACGTAACGC TGGGCAATGC CGATGAAGTA ACCGTGAACG CGCAACTCGT GGCGGCTGCG
ACAAATCTCG ATGAAGTGGT GGTCACAGGC TCTACGCTAT CGGCTCCCAA ACGGGAGTTA
GGCAATGCCA TCAGCACCAT CAAAGCGGCC GATTTAACCC AAAGCGGCTC GGGCAACCTG
ATCAACTCCT TACAAGGCAA AGTACCGGGC GCGCAAATCA CGCAGAACTC CGGCGACCCG
GCCGGTGGTA TCAGCATTCG TCTGCGGGGT ATCAAGTCGC TGGTTGGCTC GTCGGACCCG
CTCTATGTTG TGGACGGGGT TATTGTAAGC AACGCCAGTA CCAACGTCTC GCAACTGGCG
CTGGCTAACG ATGTTGGTAA CGCCAACGTC GGCCAGAACC GTCTGTCGGA TATTAACCCA
GACGATATTG CCACCATCAA TGTCGTGAAC GGGGCGGCTG CGGCTGCTCA ATATGGTTCA
CGAGCGGCCA ATGGAGTAGT GATTATTACC ACCAAGCGCG GCCAGAGTGG CAAGGCGCAG
GTCAACTTTA CCACGTCGTT CAACATCAAC GAACTGCGAA AAGGCGTACC CGTCAATACC
TATGGCAAGC AGTTCGGCTT TGCCTCGCTT CGGCTATATC CCATCGGGGT TATTTCGGCG
GCTCAGGTAG CGGCTAATCC GGGTACAACC ACGACCAGCA TTTACCGCGA CGGGACGAAC
TCCCTGCTGG CAACCAACCT CGTGGATGTA CAGCGGTATA ATTACTTCGA TCAAATCTTC
CGGACGGGCT ACGGCACCGA CAATAATCTG TCTATTTCGG GTGGTCGCGA CAACACCCAG
TATTATGTGT CGTTCGGCTA CCTCAAAAAT GAGGGCATTA TCAAAGGCAC AGACTTTACC
CGCTACAACC TCCGCGCCCG CGTAGACCAG CGACTGGCCA ACTGGGCCAA GATTTCGGTG
GGTATCAGCT ACTCGAATAG CCTTTCCAAT GAGAAGGCGA ATGGCAACGT GTTCTACAGC
CCGATCAACT CGGTCAACAT CACGAACAAC ATCTACGACA TCACCAAACG CGATGCCGCC
GGAAACTTGC AGGCTGTGGA GCCATCCCGC GTAAACCCAC TCTCGACCAT CGAAGACATG
AAGTTTTCGC AGTCGGTGAG CCGGACGATC AACAGCCTTC AACTGAACCT GACGCCACTG
AAAGGTCTGA CCGTTGATTA TATCGTAGGT GTCGATGCCT ATTCACAGTT CGGTAAAAAC
TATATTCGGC CTTACCCTTA CCAGTCTGTT GCCCAGTTAC CAGCCGCTCG TTATCCGTTT
GGTTTTGCCG CCACAGCCAC TAATCAGGTG CTGCAATTCA ACAATGACCT GAACGCGCAG
TATGAAAACC AGTTTAGTGA GAAGTTTAAG CTGAACGCGG CCATCGGCTA CAGCTATCAA
TATTATCAGG CTGATTACTC GATCAATAGC GGCCAGAACC TGTCGCCGTT TATCGAGACG
GTTAGCGGAG CCAGCAACAC GACCTACTCC GTTCGCTATG ACCTGGACCG TTTCAGCCTG
AGCGGTCTGT TTGCGCAGGC CACGCTCGGC TATAAAAATC TGGCATTCAT TACCGGGGCC
GTCCGTCGCG ATCAGTCGTC GAAATTCTCA CCAACGCAGA CCAACCAGTA TTACCCCAAA
GTAAGCGGTT CGTTCATTGT GTCGGACCTT GATTTCTGGA AAAACCTGTC GTTCAGCAAC
GCTTTCAACA GCCTGAAACT CCGGACCAGC TATGGCGAAG CCGGTAACCT GTCGGGTATT
GGTTCGTATG CCCGTTTTTA CCAGTTTAGC CCGGTGGGTT TCCTGGGTAA AAACACGGTG
GTACCCGGTA CGCAACTGGC CAACCCCGAC GTGCAACCCG AACGTATGGC TGAACTGGAG
GGCGGTGTTG ATTTGGCCTT CCTGAACGGC CGGATTGGCC TGGGTGTAAC GGCCTACAAC
CAGAAGATCA CAAACCTGGT CGTGAACCGG ACGCTGGCCC CCACATCGGG CGGTACGAGC
ATTGTGAATA ACGTTGGTTC GATGGAAAAC AAAGGGTTCG AGATTGTGCT GGACGCTACG
CCCATCAAAA CCAAAGACCT GAACTGGGAT GTAACGTTCA TTTACAACCA CAACCGAAAC
AAAGTCCTTG ATCTGGGCGG TCTGCCGATC ATTAACCCCG ATGCCTCGTC AGCGTCTGGA
ACGCCGGTCA ACTTAATCGT TGGCCAACCA GTGGGTGTGT TCTACGGCAC AGGCTATGCC
CGTAATCCGG ATGGTTCATT GCTGTTGTCG CCGTCGGGTT TCCCGCAGTC GGAGCGGGCG
ACTGGGCAAG CCAATGGCGC TGTCGATTAT GTACCGGCTC GTAATTCAGA CGGTACGCTG
GACGTTACCA AACCCCTGGC CAACGTGATC ATTGGCAATC CGAACCCAAA ATGGACGGGT
TCCTTCAGCA CCAATCTGTC GTACAAAAAA CTGAACCTGC ATGTCTTGCT GGACATGGTT
CAGGGCTCGG ATGTGTTCAA CGCGGACAAG CGGACGCGTC AGGGTGTAGG TCTTGGCGAC
TATGCCGAAC AGGAGTTACG GGGAACGCTG AAGCGGGGTT ATATCTTCGG CATTTACAAC
ACGCAGGAGT TCCGGGTCGA TCCGGGTTCG TACACCAAAC TGCGCGAGGT GTCGCTCAGC
TATACGCTGC CAACTTTTAT CAAGTCGATC AGCCGGTTAA CTATTTCGGC GGTGGGCCGC
AACCTGTATT CGTGGGATAA GTACACCGGC TTCGATCCGG AAACCAACGC GGGTGGCAAC
AATGACCTGC TGCGCGGCAT CGACTTCGGA AACGTCCCCA TTCCCCGTAC GTACCAATTC
AAACTGTCAG CGACATTCTA A
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| Protein sequence | MLGLILLLCT NVFAQSTRYT LKGRVTDPEK MGLPGTTVVL VGTTVGTTTD AEGNYTLPVT
LKPGPVTVAF TSIGYETLRQ DVTLGNADEV TVNAQLVAAA TNLDEVVVTG STLSAPKREL
GNAISTIKAA DLTQSGSGNL INSLQGKVPG AQITQNSGDP AGGISIRLRG IKSLVGSSDP
LYVVDGVIVS NASTNVSQLA LANDVGNANV GQNRLSDINP DDIATINVVN GAAAAAQYGS
RAANGVVIIT TKRGQSGKAQ VNFTTSFNIN ELRKGVPVNT YGKQFGFASL RLYPIGVISA
AQVAANPGTT TTSIYRDGTN SLLATNLVDV QRYNYFDQIF RTGYGTDNNL SISGGRDNTQ
YYVSFGYLKN EGIIKGTDFT RYNLRARVDQ RLANWAKISV GISYSNSLSN EKANGNVFYS
PINSVNITNN IYDITKRDAA GNLQAVEPSR VNPLSTIEDM KFSQSVSRTI NSLQLNLTPL
KGLTVDYIVG VDAYSQFGKN YIRPYPYQSV AQLPAARYPF GFAATATNQV LQFNNDLNAQ
YENQFSEKFK LNAAIGYSYQ YYQADYSINS GQNLSPFIET VSGASNTTYS VRYDLDRFSL
SGLFAQATLG YKNLAFITGA VRRDQSSKFS PTQTNQYYPK VSGSFIVSDL DFWKNLSFSN
AFNSLKLRTS YGEAGNLSGI GSYARFYQFS PVGFLGKNTV VPGTQLANPD VQPERMAELE
GGVDLAFLNG RIGLGVTAYN QKITNLVVNR TLAPTSGGTS IVNNVGSMEN KGFEIVLDAT
PIKTKDLNWD VTFIYNHNRN KVLDLGGLPI INPDASSASG TPVNLIVGQP VGVFYGTGYA
RNPDGSLLLS PSGFPQSERA TGQANGAVDY VPARNSDGTL DVTKPLANVI IGNPNPKWTG
SFSTNLSYKK LNLHVLLDMV QGSDVFNADK RTRQGVGLGD YAEQELRGTL KRGYIFGIYN
TQEFRVDPGS YTKLREVSLS YTLPTFIKSI SRLTISAVGR NLYSWDKYTG FDPETNAGGN
NDLLRGIDFG NVPIPRTYQF KLSATF
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