Gene Slin_4479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4479 
Symbol 
ID8728239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5430258 
End bp5430791 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content49% 
IMG OID 
Productribosomal protein L10 
Protein accessionYP_003389258 
Protein GI284039328 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.028261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCG AGGACAAAGG AGCAATTATT GAGGAATTAA CTGGAAAGTT CCAGTCGACT 
CCCTTCTTCT ACATCACGGA AGCCAATGGC ATGACGGTTG CTGAAACAAA CAACCTCCGT
CGGATGTGTT TTGAGCGGGG TATTGAGTAC AGAGTGGTGA AGAACAGCTT CATCAAGAAA
GCACTCGAAA CCCTCGATAC GGATTATACA CCGTTCAACG ATACGGTGCT TCATGGCCAA
TCGGCAGTGA TGTTTCACGC TGAAAACGGC AAAGCACCGG CCAAGCTTAT CAAGGAGTTC
CGTAGAACGA ACGACAAGCT GCAATTGAAG GCTGCTTCTA TTGATTATAG CCTATTTATT
GGTGCTGATC AACTCGACAC GCTCATCGCA CTGAAGAGCA AAGAAGAGCT GGTTGGCGAA
ATCATCGGTC TGCTACAATC GCCTGCCAAA AACGTCATTT CGGCGTTGCA AGGTGGTGGC
AACAAATTGG CCGGTATCCT CAAAACGCTG TCGGAGCGCG AGGAAGCAGC TTAA
 
Protein sequence
MKREDKGAII EELTGKFQST PFFYITEANG MTVAETNNLR RMCFERGIEY RVVKNSFIKK 
ALETLDTDYT PFNDTVLHGQ SAVMFHAENG KAPAKLIKEF RRTNDKLQLK AASIDYSLFI
GADQLDTLIA LKSKEELVGE IIGLLQSPAK NVISALQGGG NKLAGILKTL SEREEAA