| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4457 |
|---|
| Symbol | |
|---|
| ID | 8728217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 5399797 |
|---|
| End bp | 5400801 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003389236 |
|---|
| Protein GI | 284039306 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAAC CCACTCAGCA ACAACTAGTC CGAATTGGTA CTGGTAATGA TTCGCTGTCG
AAGTCGCAGA AGGAATTTAA TCGGCTCACG CAGAAAATAG AGGAAACAAC TGCTGCATTA
AAGCAACTTA GAGAGGCTTC GGACTACATC TACCAGCGAT TACAGGCCGA TTATCAACCC
CTTGTTGATC AATATATTCA GTTGCGGGTC AATCTGGTTC GGTTATTCGA CCGGGCGTAT
GAACAGGACG ACATTACGAG AACGGAGCAG AAAAAACTGG CTGATCTGAT TCAAAGCATC
GCGTTCGACT TAATTTCTCA ATACGACGTC GATAGTCTGG AACCCATTTA TAACAAATAC
AAAACGGATG ATGCCAATGA GTCAGATCAG CAAGTGGTAA CCTGGACTGA TGGAGATGAC
GAGTCAGACA GTGTAGCCGC GCAGGAGGCA GCCGAAGCCG AACGCCAGCG GCAACGGGCC
AGTAAGCCCA AATCGGAGAA GCGACTGGCG CGTGAAGCTA AAAAACAAGC CGATGAGCAG
AACACGACCA AAGCCGTTCG GACGCTTTAC ATGGATCTGG TGAAAGCATT TCACCCCGAC
CGCGAACCGG ATGAAGCCGA AAAGGTACGC AAAACGGAGA TTATGCACCG CGTTATTGCG
GCTTATGAGA AAAGCGATTT GCTGGCGCTG TTCCGTTTAC AACTCGAATT GGAACGAATT
GATCAGGCCC ATTTGACATC GCTGGCCGAA AGTCAGCTCA ATTATTACAA TAAAATATTG
CGGCAACAAG CCCAGGAGCT GGACGATGAA CTGGCCACAT TGCAAAAACA ACTGGCCCGG
ATGACGGGTA AATCCAAATT TACGGCTGGT TCGCTGGTTG GCTTCGACAT CAGTCTCAAC
AGCGACATAG GCCAACTTAA GCGGGATACT AAACAGTTGA AAAACGATTT GAAAGCACTG
GCCGATCTAG GTGTACTGAA ACAGTGGCTG AAGAGCTACC GGTGA
|
|---|
| Protein sequence | MSQPTQQQLV RIGTGNDSLS KSQKEFNRLT QKIEETTAAL KQLREASDYI YQRLQADYQP
LVDQYIQLRV NLVRLFDRAY EQDDITRTEQ KKLADLIQSI AFDLISQYDV DSLEPIYNKY
KTDDANESDQ QVVTWTDGDD ESDSVAAQEA AEAERQRQRA SKPKSEKRLA REAKKQADEQ
NTTKAVRTLY MDLVKAFHPD REPDEAEKVR KTEIMHRVIA AYEKSDLLAL FRLQLELERI
DQAHLTSLAE SQLNYYNKIL RQQAQELDDE LATLQKQLAR MTGKSKFTAG SLVGFDISLN
SDIGQLKRDT KQLKNDLKAL ADLGVLKQWL KSYR
|
|---|
| |