| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4443 |
|---|
| Symbol | |
|---|
| ID | 8728203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 5384983 |
|---|
| End bp | 5385258 |
|---|
| Gene Length | 276 bp |
|---|
| Protein Length | 91 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003389223 |
|---|
| Protein GI | 284039293 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000136242 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAAT TACCAGCCCG CCTTCCGGTT GATGGTCAGT ATATGACTCC TCGCGAATCT
GAAATAGTCT GGTTATACGC GCAAGGCTTA AGTGCCACAC AAATAGCCGA ACGACTCAAT
GTAAGTAGTA AGACTATTAA TCGCCACTGC GAGAACATTC GGGCTCGGTT TGGGCTAAGA
GGGTATCATG CCCTGCTGCA ATTTGCGCTA AAAATTCGAC CGGAGTTAGA AAAATGGGTA
AACTCACCCA TAAAAATGGG TAAACTAGCC TATTGA
|
|---|
| Protein sequence | MMQLPARLPV DGQYMTPRES EIVWLYAQGL SATQIAERLN VSSKTINRHC ENIRARFGLR
GYHALLQFAL KIRPELEKWV NSPIKMGKLA Y
|
|---|
| |