Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4400 |
Symbol | |
ID | 8728160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5336232 |
End bp | 5336978 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | pseudouridine synthase |
Protein accession | YP_003389180 |
Protein GI | 284039250 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA AACCATTTCA GGTGGTTTAC GAAGACAATC ACCTGCTTAT CGTTAATAAG GACCCCGGTA TTCTGGTACA GGGCGACCGC ACGGGCGATA TTACCCTGCT GGACGTACTT AAGGACTATA TAAAAGAGAA GTACAACAAA CCCGGTGAAG TCTTTCTGGG CCTCGTTCAC CGGCTCGACC GCCCCGTAAG CGGGCTGGTT GTGTTTGCGC GCACCTCGAA AGCGCTGGAA CGCATGAACG AAATTTTCCG AAAACGCCAG GTCCAAAAAA CGTACTGGGC TGTAGTCCGG CGTAAACCAC CGAAAGATTC GGATAAACTG GTTAACTGGC TTATCAAAGA TGAACAGAAA AACCAGGTAA CGGTCTATGA TTACGAAGTG CCCAAGTCGC AGAAAGCCGA ACTTTCGTAC CGGGTGCTTG GCAAAATCAA CGAACATTAC CTGCTCGAAG TGAACCCGAT TACGGGTCGT CCCCACCAGA TTCGATCACA ACTGGCGCAT ATGGGTTGCC CGATTCGGGG CGATATTAAA TATGGGTACG ACCGGGCTGT TGCAGACAAG AAAATTTACT TACACGCCCG TCGGCTGTAT TTCATTCACC CGATCAAGCA GGCCGGAGCC GAAGATCGAC CTATTATTTG CAAAGCGGGT TTACCGAATG ACCCGTTCTG GGAAGAGTTT CTCGAACTGG ATACCGAGAT ATACAATGAC AAGAATTTGG ATATCACCTT CGAGTAA
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Protein sequence | MKKKPFQVVY EDNHLLIVNK DPGILVQGDR TGDITLLDVL KDYIKEKYNK PGEVFLGLVH RLDRPVSGLV VFARTSKALE RMNEIFRKRQ VQKTYWAVVR RKPPKDSDKL VNWLIKDEQK NQVTVYDYEV PKSQKAELSY RVLGKINEHY LLEVNPITGR PHQIRSQLAH MGCPIRGDIK YGYDRAVADK KIYLHARRLY FIHPIKQAGA EDRPIICKAG LPNDPFWEEF LELDTEIYND KNLDITFE
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