| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4387 |
|---|
| Symbol | |
|---|
| ID | 8728147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 5321928 |
|---|
| End bp | 5322755 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | Enoyl-CoA hydratase/isomerase |
|---|
| Protein accession | YP_003389167 |
|---|
| Protein GI | 284039237 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0213556 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.916822 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTATA CGCCCGAACA AACCGCTCAA CTGCCTGCCG ATGGCTTCCG TTACTTGCTC
ACCTCAGTTG ATGGCCATGT GCTGACTGTT ACGCTGAATC GGCCAGAAAA GAAGAACGCC
CTCCACCCGC CCATGCTTGC CGAATTGGCT TTTGTACTGG CTTACGCTAA ATACACGGCT
GATATCTGGC TCGTTGTGCT GGCCGCTGCG GGTGATACCT TTTGTGCCGG GATGGACCTG
AAAAGTTTGT CATTAGGGGA TACGGAAACG GCATCGGTTC CCGCACCTTC GGGGCCGGTT
CGCCTGGGGG AGTTGATGGC TGGGTTACAC AAGCCGTGCA TAGCTTGTGT ACAGGGCCCG
GTATATGCCG GTGGCTTTCT ACTCGTGGGC GCTAGCACAT ACGTCGTTGC TTCGGAGTCG
GCAACGTTTA GTTTGCCGGA AGTAAAAAGG GGGTTGTTTC CGTTTCAGGT GCTGGCTATT
CTGCTGGACA TCATGCCCGC CCGCAAAGCG CTCGATCTGT GCCTTCGGGC GAAGACTCTA
TCATCAACCG AAGCCCTGAC GCTTGGTCTG GTGACGGAGG TTGTCCCTGC CGACGAACTG
GATAACGCAC TTGCTCGTTT GGTCGGCGAG CTTACCCAGC TTTCGCCCAC GGCCATGCAG
TTTGGGTTAC GAGCCTATCA GCAATTAAAA AACCTGCCGT CGGATGAGCA GCAGGCCTAT
TTATTCGACC AGTTTCAGCA ACTCCAGCAA ACGTCCGACG CCAAAGAAGG CATGGCCGCT
TTTCTGGAAA AACGCAAGCC GAACTGGGGC GGTGTACCAA ACAGCTAG
|
|---|
| Protein sequence | MLYTPEQTAQ LPADGFRYLL TSVDGHVLTV TLNRPEKKNA LHPPMLAELA FVLAYAKYTA
DIWLVVLAAA GDTFCAGMDL KSLSLGDTET ASVPAPSGPV RLGELMAGLH KPCIACVQGP
VYAGGFLLVG ASTYVVASES ATFSLPEVKR GLFPFQVLAI LLDIMPARKA LDLCLRAKTL
SSTEALTLGL VTEVVPADEL DNALARLVGE LTQLSPTAMQ FGLRAYQQLK NLPSDEQQAY
LFDQFQQLQQ TSDAKEGMAA FLEKRKPNWG GVPNS
|
|---|
| |