| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4382 |
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| Symbol | |
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| ID | 8728142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5316702 |
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| End bp | 5318198 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | L-fucose isomerase-like protein |
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| Protein accession | YP_003389162 |
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| Protein GI | 284039232 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00643603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGACC AATCACCAAA TGGAATAGTT CGGGCCAGCC AGGCCGCATT TGTCAAACGA
AAGCCAACGA CTGCCCGAAT TGGGGTGTTT GGGGTCGGAT ACTTCAAATA CTGGAGTCAG
TTCGACGGTT TACTGGATAA TCTACTGAAA AAACAGGCCG TTTTTATCGA CAAAGTCGAA
GCGATGGGGG CCGTTGAAGT CGTAGACTTT GGACTGATTG ACGATGTGAC GAAAGCCTAT
GAGCTTGTCC CGAAACTGAA CGCGGCCAAT CTGGACCTGA TTTTCTGCGA TATGCTGACC
TATGCTACGT CCAGCACGTT CGGTATCATC ATTAAAAGCG TCGACATTCC CATTGTTCTG
GTGGCCCTTC AGCCCGATAA GGCCATGAAT TACAGCCAGG CGTCGACCTA TCTTCAGTTA
TACAATGACG ATATCTGCTC GTTGCCCGAG TTTGCCGGAG TTGCCGTTCG GATGGGCAAA
AAAGTGCCGC AGATGATTAT CGGCACCTTG TACGACGACC CGGCAGCCGA TGCTGAGATT
GAGGAATACT GCCGGATTGC GGCCGTACTG CACGATTTAA AGACGGCCAG GATCGGGCAT
ATCGGACACC CCATCGAAGC CATGCTCGAC ATGCACTCCG ACTCGACTAT GCTCACGGCT
CATTTTGGTG CCCACATCGT TCAGTGCGAA GCACACGAAA TTGTTACGCA GTACCAGCAG
GCGACAGAAG CTGAAATCAA TGCCGTTAAA GAGCGTATCC TGGCCTTTTT CGATACCCCC
GACCCGGTCT CGGACCCGAT CTCGGAGAAA CTGCGGGACT CTGATCTGCA CATTGCGGCT
CAGGCGGCTG TAGCGCTTGA GCGGTTCATA AAAGCCAAAA AGCTGGACGG GCTGGCCTAT
TACTACGATG GCCCCGATGG AAGCGACACG CGGGTGGTCA TGTCGAACCT GATTGTCGGT
AATTCATTGC TTCAGGGCGC GGGCTTCCCT ATGTGTGGCG AATCGGATTT AAAGACCTGC
ATTGCCATGC TCATTATGGA ACGGCTGGGC ATTGGCGGCA GTTTCGCCGA GTTTCACCCG
GTCGATTTCA GGGAAGATTT TGTGCTCGTC GGGCACGACG GGCCACACAA CATTGCCATT
GCCGAAGGGC AGCCAGTACT GCGGAGCCTG AAAAAATACC ACGGCAAGCC CGGTTTCGGC
GCCGGTGTGG AGTTCAAGAT TAAGGAAGGC CCAATCACTA TGCTGAGTAT CAGCTCCACC
TACGAGGGCA AGATGAAATT TGTTATTGCC GAAGGCGAAT CCATTGCCGG GCCTATTCCA
CCAACGGGTA ATACCAACAC GCGGGGCTTT TTCAAACCAG ACGTGCGGAC GTTTCTCAAA
CGCTGGATTC AGGAAGGACC AACCCACCAC TTCGCGCTGG GCATTGGCCA CCATGCCGAG
TCGATCCGGA AAATTGCCGA CTACCTCAAA ATCGAATCCG TCATCATCAA TGGATAA
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| Protein sequence | MQDQSPNGIV RASQAAFVKR KPTTARIGVF GVGYFKYWSQ FDGLLDNLLK KQAVFIDKVE
AMGAVEVVDF GLIDDVTKAY ELVPKLNAAN LDLIFCDMLT YATSSTFGII IKSVDIPIVL
VALQPDKAMN YSQASTYLQL YNDDICSLPE FAGVAVRMGK KVPQMIIGTL YDDPAADAEI
EEYCRIAAVL HDLKTARIGH IGHPIEAMLD MHSDSTMLTA HFGAHIVQCE AHEIVTQYQQ
ATEAEINAVK ERILAFFDTP DPVSDPISEK LRDSDLHIAA QAAVALERFI KAKKLDGLAY
YYDGPDGSDT RVVMSNLIVG NSLLQGAGFP MCGESDLKTC IAMLIMERLG IGGSFAEFHP
VDFREDFVLV GHDGPHNIAI AEGQPVLRSL KKYHGKPGFG AGVEFKIKEG PITMLSISST
YEGKMKFVIA EGESIAGPIP PTGNTNTRGF FKPDVRTFLK RWIQEGPTHH FALGIGHHAE
SIRKIADYLK IESVIING
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