| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4377 |
|---|
| Symbol | |
|---|
| ID | 8728137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 5307574 |
|---|
| End bp | 5308290 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | putative lipase |
|---|
| Protein accession | YP_003389157 |
|---|
| Protein GI | 284039227 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.367331 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGA TTTTTTTATT CTTCAGCTTA CTGACAGGCC TCTCCTTCAA TGCGAAGGCC
CAGTCGCCAT CCCTCGCCGA TTCGGCAACG TATCTATCTG ACGTAAAAAA GGAACTGATG
GTGCAATGGC CTAAAAACCG GACGATCAAC CTGGTGTTTC ATGGTCATTC GGTACCCGCG
GGGTACTGGC ACGATCATGA GGTGCATACG CTGGAATCGT ACCCAAATCT GGTACTGGCC
CTGCTGAAAA AGCAATACCC GTACGCGGTG ATCAATGTGA TCGTTACAGC CATTGGCGGA
GAGAATGCTA TTAAAGGGCA AACCCGTTTT GAGCAGGAGG TACTGGTGCA TAAACCGGAT
GTGCTGTTCA TCGACTATGC GTTAAACGAC CGGTTTTCGG ACATCGGCAA CGTGAAAGAA
GCCTGGTCGA AGATGGTGGA AGCGGCCCTG GCCCGAAACA TAAAAGTCAT TCTTCTGACG
CCCTCGCCCG ATCAGCGGCT GACTATTCTG GACCCGGCCA ATCCGCTGGA GCCGCACGTT
CAGCAAATTC ATCAGCTGGC CAAGCAGTAC CACGTGGGTT TGGCAGACCC GTACAGCCAG
TTCAAGCGGG TGGCTAAAGG CGGAGAGCTG GCTAACTACA TGTCGCACGT AAACCACCCG
AACCGAGCTG GTCACGACCT GATCGCGAGC GAAATTGTGA AGTGGTTTAC GAAGTAA
|
|---|
| Protein sequence | MTKIFLFFSL LTGLSFNAKA QSPSLADSAT YLSDVKKELM VQWPKNRTIN LVFHGHSVPA
GYWHDHEVHT LESYPNLVLA LLKKQYPYAV INVIVTAIGG ENAIKGQTRF EQEVLVHKPD
VLFIDYALND RFSDIGNVKE AWSKMVEAAL ARNIKVILLT PSPDQRLTIL DPANPLEPHV
QQIHQLAKQY HVGLADPYSQ FKRVAKGGEL ANYMSHVNHP NRAGHDLIAS EIVKWFTK
|
|---|
| |