| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4365 |
|---|
| Symbol | |
|---|
| ID | 8728125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 5293006 |
|---|
| End bp | 5294274 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003389145 |
|---|
| Protein GI | 284039215 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.893788 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TGCTTCTATC CGCCTACGCC TGCATTCCCA ATCAGGGTTC TGAAGAAGGA
ACGGGCTGGA CGTACGCCAC TACACTGAGC CTGAACGAGC TGGAAGTTCA CTGTCTGACC
AAAAAAGACG GCAGGGCAGC CATCGACCCA CTACTGGCCA ACGGCTTCTT TCCGAATCTG
ATGGTCCACT ACGTGCTGCT GCCTAGGTGG GTCGACAAAT TCTGCAACTC CAACCTGATC
GGCATGTACT TTCATTACCT CTACTGGCAG TGGAGCGCGA TGAAGCTGGC CCGTCGGCTG
GACCGGATTC ATCAGTTCGA TTTGGTGCAT CATGTCACGT ACGGCAGCAT TCAGCTGGGC
AGTTTCATGT ACAAGCTGCG CAAGCCGTTC ATTTTTGGCC CCGTAGGTGG CGGACAGCGG
GCACCCGAAA ACATGAAGCG GTACTTCGGC CAGTACTGGT CGCGGGAGTG GATGCGCGAC
TGGGTAGGTA CGATACTCCA GTACGTCAAT CCGGGTTTTT ACAAATCCGT AGCCACCGCC
GACCGGCTGG TTGTGACCAA CATGGACACC TTTGCCCTGG CCCGGAAATT ACGCCCCAAT
CAGCCCGTCG ATCGCATTTG GGACGCGGGC CTTAGCCCAT CATTCCTGCC GGCGAAAGCA
GTCGAACACT ACCCCGGCCA TCAACTGAAG TTGCTCTGGA CGGGCCGCAT GTTACCCCGA
AAAGCCCTTG AATTGACAAT TCAGGCGCTC GGGAAAGTGG ATCGGGCCAT TCCCGTAACC
CTCACCATTG TGGGCGGCAA AGGCGAAATG GCCGAACAGG TACCGAATTA TCTCGACCGC
TACAACGTGC GCGACCGGGT AAACTGGGTG GGCCACGTGT CCTATCAGGA AGTAAAAGAG
TTTTACGAGC AATCGGATGT ATTCTTCTTC ACGAGCCTGC GCGACTCCTG CCCGCATCAG
TTGCTGGAAG CCATGGCTTA CTCGCTGCCC GTTGTTACGC TGGATTTGCA CGGCCAGGCC
GAACTGGTGG ACGATTCGAC GGGTATCCGG GTGAAAGTCA CCGACGAAGA GCAGGTCGTG
GCTGAGCTGG CCCGCGCCAT CGAGTGGATG TACCATCACC CAACAGAGCG GCTGGCCATG
GGACAGGCGG GGTATGCCTT CGCCCAGACT CAGGTCTGGG AAACCAAGAT CCGGGTGTTT
ATCGACGAGA TATACCCGTC CGTTCTCCCC AAACCAGTTA CGTACGCTGC GGCTCTCAAA
CGGAGCTAG
|
|---|
| Protein sequence | MKKVLLSAYA CIPNQGSEEG TGWTYATTLS LNELEVHCLT KKDGRAAIDP LLANGFFPNL
MVHYVLLPRW VDKFCNSNLI GMYFHYLYWQ WSAMKLARRL DRIHQFDLVH HVTYGSIQLG
SFMYKLRKPF IFGPVGGGQR APENMKRYFG QYWSREWMRD WVGTILQYVN PGFYKSVATA
DRLVVTNMDT FALARKLRPN QPVDRIWDAG LSPSFLPAKA VEHYPGHQLK LLWTGRMLPR
KALELTIQAL GKVDRAIPVT LTIVGGKGEM AEQVPNYLDR YNVRDRVNWV GHVSYQEVKE
FYEQSDVFFF TSLRDSCPHQ LLEAMAYSLP VVTLDLHGQA ELVDDSTGIR VKVTDEEQVV
AELARAIEWM YHHPTERLAM GQAGYAFAQT QVWETKIRVF IDEIYPSVLP KPVTYAAALK
RS
|
|---|
| |