Gene Slin_4329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4329 
Symbol 
ID8728089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5250100 
End bp5250702 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content52% 
IMG OID 
ProductYceI family protein 
Protein accessionYP_003389110 
Protein GI284039180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.969804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.149474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC TTCTCATTAG TTTCTTTTTC GTATTTGCCC TTGTTTCATC AACTGTGGCG 
CAGTCTCAAT TCACTATCGA TGCCAGCACC AGCCAGCTCA ACTGGACGGG TTACGCGGAG
CTTGGCTCCT GGGCTCCCTC AGGCACGATT CAGGTAAGTA AAGGGCAGCT TTCCGTAGCG
GGCAAGCAAA TAACCGGTGG CCGAATGACT ATTGATATGA CTACCCTTCA ACATGAAGAT
GCCAAACTCC AGGCGCATTT GCGGGGTGAA GATTTCTTCG ATATTGCCCG CTATCCAACC
GCCACCTTTC TGCTATCCAG CTTATCGGGC CAGGTCGCAA CCGGCCAATT AACGATTCGG
GGCATTACCC GGCCGGTTAC GTTTCCGGTT GTCGTTAGCC CGGAAGGTGA CGGATTACGC
GTCAAAGGCA AAGCCCTTAT CGACCGAACG CAGTTTGCCA TTCGCTACAA TTCGACCAGT
TTCTTCTCGG GCCTGGGCGA TTATGCGATC AAAAACGAGT TTTCGCTGGC GTTCAATATC
GTAGTAAAAC CGGCTGGTAA GCCGGGCATT GCGGGAAGGC TAGCCGAAAG CTCCCGCCGA
TAA
 
Protein sequence
MKTLLISFFF VFALVSSTVA QSQFTIDAST SQLNWTGYAE LGSWAPSGTI QVSKGQLSVA 
GKQITGGRMT IDMTTLQHED AKLQAHLRGE DFFDIARYPT ATFLLSSLSG QVATGQLTIR
GITRPVTFPV VVSPEGDGLR VKGKALIDRT QFAIRYNSTS FFSGLGDYAI KNEFSLAFNI
VVKPAGKPGI AGRLAESSRR