| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4318 |
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| Symbol | |
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| ID | 8728078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5227731 |
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| End bp | 5229176 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003389099 |
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| Protein GI | 284039169 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0553974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGT ACACGAAAGC AATAAAATTA CTCGTACTCA CCGGCCTTAT CAGCCTGACC
ACGGGCTGCG GAGAGAAATT CGTTGACCTG ATTCCAAAGG ACGTCATTCC CGTTGGCAGC
TTTTACAAAA GCGAAGCCGA CATCCGGTCG GCTCTGACCG GGGCCTATGG TAACCTGCGG
GGTATTTACA ACTCGTATTT TCTATATACC GAGGTGCCAT CGGACAACAC CCGGACCTTC
GGTGAGAACG AAGTCGGGCA GGGTGAACTG GATAAACTCA CCTACCAGCC GTCCAGTACC
AACATGTCGG CAGCCTGGAA CGATGCTTAC CGAACCATCT CGAACTGTAA TGTCATCCTC
GACAAAATAG GGCCGGTAAC CTTTGCCAGC ACAACGACCA AAGATCAATA TACCGGCGAG
GCCAAATTTC TGCGGGCACT CATGTATTTC AACCTGGTTC GGTACTTCGG CGATGTGCCG
CTGGTGCTGA AAGAAATAAC GACCGAAGCA GACGCCTACA CTTACAAGCG GAGCCCGGCA
GCTACGGTAT ACGGCCAGAT TGAAAAGGAC CTGCTGGAGG CCGAAAAAGT GCTGCCTGCC
AAATACACGG GCGCCAATAT TGGGCGAGCC ACCACGGGTG CGGCCAAATC GCTGCTGGGT
AAAGTGTATC TGCAGCAGAA AAAATGGCCC GAGGCAGAAG CCAAACTAGC CGAGGTCATT
GCCGCCGGAA CCTACCGGAT TCTGCCCAAT ATTACCGACG TGTTTGGCGT TGGGCGCGAC
AATAACGACG AAATCGTGTT TGCCGTCCAG TACGTGAGTG GCGGCTTTGG CGAGGGAAAT
TCCTACTCGG CCAACTTTGC GCCCCAGCCA TCCGGCACGT CGATCATCGG CGTTACGGGC
AACAGTTTTA ACACTGGAAC ACAAGACCTA TACGACGCCT ACGAAAAAGG CGACGTGCGC
CGGGATGCGT ATATGGGCAT CTACGGAACC GCCCCCAACG TTTATTACTG GGCCAAAAAA
TTCATTTACT ACGTCACGCT CCAGAACGAA GGGGAAAACG ACTGGCCGGT ACTGCGCTAT
GCCGACGTGT TGCTGATGTA TGCCGAAGCG GCTAACAACA ATGGCAAAAC AGACCTGGCT
CTGACGCAGG TGAACACTAT CCGAAAGCGG GCCGGACTGG CCGAAAAAAC GGGTCTATCG
AAGGCAGATA CGCAACTGGC TATCGAGCAG GAGCGCCGGG TGGAGCTGGC TTTCGAGGGG
CACCGGTGGT ACGATCTCAT TCGGTGGGAT AAAGAGGTCG CTACCATGCT GGCCTTCAAA
GCGAAGTACA CGGCTATCGA CCCGGCGAAC GCCAATATGA GTCCGGCACC CACCCGGCGA
TTGTATCCAA TTCCCTTCCG GGAAATGACA CTCAACCCGA ATCTGACCCA AAACCCGGGG
TATTGA
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| Protein sequence | MKPYTKAIKL LVLTGLISLT TGCGEKFVDL IPKDVIPVGS FYKSEADIRS ALTGAYGNLR
GIYNSYFLYT EVPSDNTRTF GENEVGQGEL DKLTYQPSST NMSAAWNDAY RTISNCNVIL
DKIGPVTFAS TTTKDQYTGE AKFLRALMYF NLVRYFGDVP LVLKEITTEA DAYTYKRSPA
ATVYGQIEKD LLEAEKVLPA KYTGANIGRA TTGAAKSLLG KVYLQQKKWP EAEAKLAEVI
AAGTYRILPN ITDVFGVGRD NNDEIVFAVQ YVSGGFGEGN SYSANFAPQP SGTSIIGVTG
NSFNTGTQDL YDAYEKGDVR RDAYMGIYGT APNVYYWAKK FIYYVTLQNE GENDWPVLRY
ADVLLMYAEA ANNNGKTDLA LTQVNTIRKR AGLAEKTGLS KADTQLAIEQ ERRVELAFEG
HRWYDLIRWD KEVATMLAFK AKYTAIDPAN ANMSPAPTRR LYPIPFREMT LNPNLTQNPG
Y
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