| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4308 |
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| Symbol | |
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| ID | 8728068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5211737 |
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| End bp | 5215870 |
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| Gene Length | 4134 bp |
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| Protein Length | 1377 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | Fibronectin type III domain protein |
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| Protein accession | YP_003389089 |
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| Protein GI | 284039159 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0936224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00620072 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAAAAT CAGGCCTGTT TTGTTTACTT ATCCCCTTCG TCTATGCGGG GGCCATCGCT
AATACGACAC CCCTTATTAC CCCAATCTCC ACCCCAAACG CCCAGGCCCA TTTGATCGGG
CGAGCCTTAA CGCCCGGCGC TTTAGCTCCT GTCTCTGCCG ATTTACAACC TACCCGCAGC
CAGATCGATG CGGCTGCCAA CGAGGCTCAG ACCCAGGGAC GAATCATTCC CATTACACCA
GGTGGCATGA CCATTCCTGC CGCCTTGCAG GAGGTTGCCA GTTTGCCCGT AACATTTCGG
TCGACCATTG GCAACTGGAA TTACGACATT ACGGTCCTCT CGATGAGTTT TACCCCGACG
GGTTCAGTGC TCTCCATTGG CTGTCGGTTT TATCTACCCG GCTCAACACC CAATACAGCC
CTTTACTTTG GAGCCAACGA CATTGCGGTC TCGGGCAAGA GTGGCTTCAG TGGCGATTTA
CCCATTCTGG AAAGCCTGCT CAGCGATGAA AAAAGTAGCG AGCTGGATGA TCCAACGGGA
AAATTGGGTG GTCAAACTAA ATTTTTCGAG TTTCCCTTAG CTGCCTTTCA GGGTAAAGCC
TGGATGGGGC TGGGCAAAGA CTCTAAAATT AGTTTCGCCT GCGGAGAGTT TAAAAAATTC
TCCCTCACGG GATTTGTGAA AGTCTATGAG CTGGTAAAGC GGGAAGATCC GGCTGGCCAG
TCGCTGACTG ACGGTAGGCC CCTGCAATTT GCCTGGACCA GCCAGGATGT GTTCGACTGG
CAGGATATCT ATTTCCCCGT GACGGCCTCG CGGGGCTTTC ATTCAGCCAA TGCAACGGAT
ATTGGCTTTC ACCCAACGGA TAAAACGAAG GTCATTCTTG ACCTGAGCCA ATATCAGAGT
CCGGCCAGCC TGCCCGATTG CGGGGGCGGC AACCTGGGCA ATAGCTGGCA GGGCATTCAG
TTCGATGCCT TTGCCATTCG GCTGCCCAAG CTCTTTAAAC TTCGACAGCC GCGCACGCTT
CTGGGACCGG GAACAAATCT GTTTTTGTCA CCCACTGGGG TCATTGGGAC GGTGAGCGCT
CAGCAGGTGT TTACGCTGGA AGAGGGCTAT ACCGATGAGA TCAACAAATT TGACCTTTCC
CTGGATCAGG TGACGGCCAA TTTTAGCTGT GGAGCCTCGG CCAACCTAAG CCTGTCGGGA
CGATTCCGGC TGGGTACCTG TGGAACGGGA ACCGATAAGG CCTCCGAATT ATATTATAAC
GTGGTGTACA CCGAACAGGA TCGACACTAC CAGGTACTGG TCAAGGAAAA CGCAACTGAT
CGGTTCCGAA ACAACGGGTT GACCCTGTCG ACAGGCTCCA CCCTGAGTTT ATCGATCCAG
AACGAAAGCT TTGTCTTTCA GACAGCGCTG GCCGCCAGGC CTCGCCTGAG TACACCCGCT
TATCACAACA GTATCTGTCT AAATTACCCT ACAACCCTCA CCGTTAGTAA CTGTGAATCC
ATCACCCGCA ACTGGTCGAC GGGCGAGATC GACAAAAACA CGGTGACGAT CAATCCTCAA
ACGCAGACGA CCTATACGGT CAACTGCGTG GATAAGTACT GTATCAGCGA GTCGTCGAAC
GAATTGGCCA TAACCGTCTA TTCATCCCTG CCACAACCAA CGCTGACGGC CACCAGCCCG
GCTTTTTGTA CCTATCAGAA TGCGACGCTC AGCGCTGATA ACTGCGTGGG TAAACTCGAA
TGGCAAACGC CTGACAATAC CACGTTCCGG GAGCTGAGCG CCAATCGACA AACGGCGTAT
TTTCCCGGTC AGTCGGCTAC GGCTACATTT GTCTATCAGG TACGGTGCAA CCTGAATACG
TGCCTGAGTC CACCCAAAGA CCTTTCCCTG ACGGTCTACC CGGAGCCCAA AGCTCCCTTG
CTCTGGTCAA GTGCGACCAG CAATACTATT GACCGAAATG AGAGCGTTAC CCTAAGCGGT
TCCTGTACCG ATAATAACCG TCTTGTGTGG GAGAATCTGC CGGAAGCCAG GGTTCAATTA
GCCGCTTCGA CTAGTTATCA GGCCATATGC AAAAACCCCG AAACAGGGTG TCAGACTCAA
AGCCCCAGTC GTATTGACAT CACCGTTCTC TATTTCCCAC CGGCTGCGCC GTCGCCTGTT
ACGTTTGGTG CCGTCGGCAC GAACTATATC ACCGTGAACT GGCGGGACAA TTCGGGGAAT
GAGGATGGGT TTTGGATTGA TCGGTCAACA TCGTCCGAAT TCACTAATTC CGTTCGGATC
GGTGATGTGG GTACCAATAC GACTTCCTTC TTGGATCAGA ATCTGAGCGA AGGGGTTACC
TATTATTACC GGGTTATTTC GCATAATCGG TATGATAATG GGTACTCCGA AATTGCTTTC
CGGTCTACGG GCATCACCCC CATAAAGCCC GTTTGTAATC CACCAGTCGC TCCCAGCATA
TCGGCCACAA ACATCTCGAT CAATGAAGGC AAAAGCGGGA CTCTCAGCGT AGAAGGCTGT
TCAGGTGGGG CAATTCTGTG GAATACGGGC AGTCAGGAGG CCAGTATCAG CGTCAATAAG
GCGGGCTATT ACACTGTTTC CTGTACCGTC AGCAACGACT GTGGTAGCAG TAGTAGTAGT
ACAGGTGCCA CCGTCACCAT CAACAACAAA CCACCTTGTG ATCTTCCTCC TACACCCTCT
ATTTCGGTCT CGGCCATCAC CATTACTGCC GGTGAGAGCG GTATACTCAC CGTAGAGGGC
TGTTCGGGCG GTGCCGTATT ATGGAGCACC GGGGCAACCA CAACTGATAT CATCGTGAAT
CAGTCAGGCA ACTACTCTGT TTCCTGTACC CGAACGAACG ATTGTGGACA AAGCAGCAGC
ACGACCGATG GTAAGGTAAC TGTCATTTCT AAGCCCTGCA CGCAGCCCGC TGCACCTACT
ATACAAGTAG CTGATGTAAC GATAAGTGCG AATGAATCGA CTGGTACATT GACCGTCGTT
GGGTGTGCTG GAACAATTAA ATGGATGACC GATAAGACGA CCGACACTCA GACGGCGAGT
ATCACCGTAC CCCCTGGCTA TTACTCCGTT ACCTGTACCG TTTTTGATCA GACCCAGACG
TGTAGTAACA GTAGCACGAC CGGCGGTTGG GTAAGGCAGA GTACCGCGCC ATGTAATGCC
ACCAAACCTT CGGTAATAGC CAATCAGGGA ATCATCAATA AAATGGAATC GGTTAAACTG
ACGGCTAGTT CTTGTTCGGT TGGGGATTTG GAATGGCAGG ATGATTTTGA TAATTCTCAA
CCTGAGCGTA CGTTAACGCC TGACCAAAGT ACCACATATC GTGTCCGCTG TTGGGTGTCT
GACATCTGCC AAAGTGAATG GGCAGAGGTG ACCGTTACGG TCAAACAGCC CTGTAATCCT
CCCTCTGAAC CGGTTATTAC GGGTCCAGCT GAAGTTGAAA AAGGGGTATT GTTTTCGCTA
ACGACCACAG GCTGCGATGA TTGTGACATA AATTGGTCTG CGTATGATCG GTGGGTTTGG
CCAACGGGGC AACCCATTCC CAAACCAGCT CCATATACCA TTTATACTTC GATTACGGCG
GATAAAACAT TTACCGTTAG CTTCTCCAAA GATGGATGTG AGGGACCCGT TGCGACGAAG
ACAGTGAAGC TAAAGGTGAT TCCTATTTCA TATCCTCCAC CGAATATCCC AAGCATTTCT
GTCTCAAAAA CAGTGATCTG CCTAGACAAA AGTGAATCCA GCCAATTAAC CGTTGACAAT
TGTAATGGAA CGCTCTCATG GAGTACGGGA GAAACAACAG CCTCTATTAC TGTCTATGAA
GCCAAGAAGT ATATAGCCTA TTGTGCCACG ATTGGTTATT CTGCCGTTTC GACGGATATA
CTCATTAAAA ATTCAACCCC AAGCATTTCT ATTACACGAA TAGGTAAATA TTTCAATGCC
GAACAAACCG GCTGTACAAC TGAAATTAAA TGGTTTAAAG AATGGGGCGG ACCGAAAATT
CAGCTTCCAA GCGGCAGTTC TGTGGATACA TCATACTATG GATTTGGTCG TTATGAAGCC
CGATGTGGTA ACAGTTGTGG AGAGGTATAT GCTGTTCATT ACGTAACACC ATAA
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| Protein sequence | MLKSGLFCLL IPFVYAGAIA NTTPLITPIS TPNAQAHLIG RALTPGALAP VSADLQPTRS
QIDAAANEAQ TQGRIIPITP GGMTIPAALQ EVASLPVTFR STIGNWNYDI TVLSMSFTPT
GSVLSIGCRF YLPGSTPNTA LYFGANDIAV SGKSGFSGDL PILESLLSDE KSSELDDPTG
KLGGQTKFFE FPLAAFQGKA WMGLGKDSKI SFACGEFKKF SLTGFVKVYE LVKREDPAGQ
SLTDGRPLQF AWTSQDVFDW QDIYFPVTAS RGFHSANATD IGFHPTDKTK VILDLSQYQS
PASLPDCGGG NLGNSWQGIQ FDAFAIRLPK LFKLRQPRTL LGPGTNLFLS PTGVIGTVSA
QQVFTLEEGY TDEINKFDLS LDQVTANFSC GASANLSLSG RFRLGTCGTG TDKASELYYN
VVYTEQDRHY QVLVKENATD RFRNNGLTLS TGSTLSLSIQ NESFVFQTAL AARPRLSTPA
YHNSICLNYP TTLTVSNCES ITRNWSTGEI DKNTVTINPQ TQTTYTVNCV DKYCISESSN
ELAITVYSSL PQPTLTATSP AFCTYQNATL SADNCVGKLE WQTPDNTTFR ELSANRQTAY
FPGQSATATF VYQVRCNLNT CLSPPKDLSL TVYPEPKAPL LWSSATSNTI DRNESVTLSG
SCTDNNRLVW ENLPEARVQL AASTSYQAIC KNPETGCQTQ SPSRIDITVL YFPPAAPSPV
TFGAVGTNYI TVNWRDNSGN EDGFWIDRST SSEFTNSVRI GDVGTNTTSF LDQNLSEGVT
YYYRVISHNR YDNGYSEIAF RSTGITPIKP VCNPPVAPSI SATNISINEG KSGTLSVEGC
SGGAILWNTG SQEASISVNK AGYYTVSCTV SNDCGSSSSS TGATVTINNK PPCDLPPTPS
ISVSAITITA GESGILTVEG CSGGAVLWST GATTTDIIVN QSGNYSVSCT RTNDCGQSSS
TTDGKVTVIS KPCTQPAAPT IQVADVTISA NESTGTLTVV GCAGTIKWMT DKTTDTQTAS
ITVPPGYYSV TCTVFDQTQT CSNSSTTGGW VRQSTAPCNA TKPSVIANQG IINKMESVKL
TASSCSVGDL EWQDDFDNSQ PERTLTPDQS TTYRVRCWVS DICQSEWAEV TVTVKQPCNP
PSEPVITGPA EVEKGVLFSL TTTGCDDCDI NWSAYDRWVW PTGQPIPKPA PYTIYTSITA
DKTFTVSFSK DGCEGPVATK TVKLKVIPIS YPPPNIPSIS VSKTVICLDK SESSQLTVDN
CNGTLSWSTG ETTASITVYE AKKYIAYCAT IGYSAVSTDI LIKNSTPSIS ITRIGKYFNA
EQTGCTTEIK WFKEWGGPKI QLPSGSSVDT SYYGFGRYEA RCGNSCGEVY AVHYVTP
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