| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4261 |
|---|
| Symbol | |
|---|
| ID | 8728020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 5143438 |
|---|
| End bp | 5144958 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_003389044 |
|---|
| Protein GI | 284039114 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.362858 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAG CCCTTTTCCT TTTATTCAGT AGCTTATGCC TACTCGGCCA ATCGGCTGTG
GTAGCGCAGC AGAAGCCCAA TATTGTGCTC ATCTACGCCG ATGATCTGGG CTATGGCGAC
ATCAGCTGCA ATGGCGCGAC AAAAATCCGT ACGCCAAACA TCGACCGGGT GGCCCGCGAA
GGATTGAACT TCACCAACGC CCACGCGTCG TCGTCGACCT GTACACCCTC GCGCTACACC
CTCCTGACGG GTGCCTACGC CTGGCGTAAA ACAGGCACCG GCATTGCGCC AGGCGATGCC
GCTCTGCTCA TCCCGACCGA CCGCGTCACG ATGCCCGGCA TCTTACAAAA AGCAGGCTAT
AAGACGGGGG TCGTTGGCAA ATGGCATCTG GGACTTGGCC CCAAAGGGGG TCCCGACTGG
AATGGCGACA TAAAACCCGG ACCGCTCGAA ATCGGCTTCA CGTACTCTTT TCTGCTACCC
GCCACCGGCG ACCGGGTGCC CTGCGTGTAT GTCGAAAATC ACCGTATCGT CAATCTGGAC
CCGGCCGACC CGGTTCAGGT AAGTTATAAA GAGCCGATCG GAACCGAGCC GACCGGCAAA
GACCATCCGG AGTTGCTTAA AATGTTGTTC TCCCACGGAC ACGACCAAAC GATCATCAAT
GGAGTTAGCC GAATTGGTTA CATGAGCGGG GGAAAGTCGG CCCGGTGGGT CGATGAGGAG
ATGGCGGATG TGCTGACGGG CAAAGTGAAC CAGTTTATCG AGACCAGCAA AAGCGGTCCT
TTCTTCGTGT ATTTCTCCAC GCACGACATT CACGTGCCGC GTATGCCCCA CTCCCGTTTT
GCGGGCAAAA GTGGGATGGG GCCGCGTGGT GACGCCATTC TGCAGCTGGA CTGGTGCGTG
GGCGAAGTCA TGAAAACCCT GGACCGGCTG GGTTTAAAAG ACAACACGAT GGTGATCATC
AGCAGTGATA ACGGCCCGGT TGTCGATGAC GGCTACAAAG ATCAGGCGGT TGAAAAACTA
AACGGCCACA AACCCGCCGG ACCTCTGCGT GGGGGTAAAT ACAGTGCGTT CGATGCCGGA
ACCCGGGTGC CGTTTATCGT ACGCTGGCCG GGGAAAGTGA AGCCTGGCAT CTCCGATGCG
CTGTTTAGTC AGGTCGACCT CGCGGCTTCT TTTGCTGAAC TAGTGGGCCA GCCATTGGCG
AAAGGAGAAG CTCCCGACAG CTTTAATAGC CTGACGACGC TCCTGGGGAC AACTAAAAAG
AGTCGTGAAT ACGTTATAGA ACATGCGATC AATGGCACGC TTTCGCTGAT ACGTGGCAAC
TGGAAATACA TCGAACCTTC TGGTGGCCCG ATACTCAACC GTGAAACCAA TATCGAAACG
GGGTATGCCC CACAGCCGCA GTTGTATAAC CTGCAAACCG ATCTTGGCGA AACGAAGAAC
CTGGCCGAGA GCAACCCACA ACTAACTTCC GAGCTGGCCG CATTACTGAA AACCATCCGC
GAAAAAGGAA ACACCAATTA G
|
|---|
| Protein sequence | MKPALFLLFS SLCLLGQSAV VAQQKPNIVL IYADDLGYGD ISCNGATKIR TPNIDRVARE
GLNFTNAHAS SSTCTPSRYT LLTGAYAWRK TGTGIAPGDA ALLIPTDRVT MPGILQKAGY
KTGVVGKWHL GLGPKGGPDW NGDIKPGPLE IGFTYSFLLP ATGDRVPCVY VENHRIVNLD
PADPVQVSYK EPIGTEPTGK DHPELLKMLF SHGHDQTIIN GVSRIGYMSG GKSARWVDEE
MADVLTGKVN QFIETSKSGP FFVYFSTHDI HVPRMPHSRF AGKSGMGPRG DAILQLDWCV
GEVMKTLDRL GLKDNTMVII SSDNGPVVDD GYKDQAVEKL NGHKPAGPLR GGKYSAFDAG
TRVPFIVRWP GKVKPGISDA LFSQVDLAAS FAELVGQPLA KGEAPDSFNS LTTLLGTTKK
SREYVIEHAI NGTLSLIRGN WKYIEPSGGP ILNRETNIET GYAPQPQLYN LQTDLGETKN
LAESNPQLTS ELAALLKTIR EKGNTN
|
|---|
| |